Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA/nlmT   Type   Regulator
Locus tag   NW981_RS01725 Genome accession   NZ_CP102956
Coordinates   376765..378906 (+) Length   713 a.a.
NCBI ID   WP_258410392.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 26-G-G     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 371765..383906
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NW981_RS01690 (NW981_01690) selX 371814..372425 (+) 612 WP_000473144.1 staphylococcal enterotoxin-like toxin X -
  NW981_RS01695 (NW981_01695) - 372794..373162 (+) 369 WP_000849163.1 YxeA family protein -
  NW981_RS01700 (NW981_01700) - 373343..373915 (+) 573 WP_000769722.1 PepSY domain-containing protein -
  NW981_RS01705 (NW981_01705) - 374053..374316 (-) 264 WP_001055897.1 helix-turn-helix transcriptional regulator -
  NW981_RS01710 (NW981_01710) - 374635..375623 (+) 989 Protein_339 transposase -
  NW981_RS01715 (NW981_01715) - 375716..375967 (-) 252 WP_258410390.1 GlsB/YeaQ/YmgE family stress response membrane protein -
  NW981_RS01720 (NW981_01720) - 376364..376558 (-) 195 WP_258410391.1 Blp family class II bacteriocin -
  NW981_RS01725 (NW981_01725) comA/nlmT 376765..378906 (+) 2142 WP_258410392.1 peptidase domain-containing ABC transporter Regulator
  NW981_RS01730 (NW981_01730) - 378919..379572 (+) 654 WP_258410393.1 DsbA family protein -
  NW981_RS01735 (NW981_01735) - 379980..381552 (-) 1573 Protein_344 IS3 family transposase -
  NW981_RS01740 (NW981_01740) - 381668..381733 (-) 66 Protein_345 hypothetical protein -
  NW981_RS01745 (NW981_01745) - 381911..382492 (+) 582 WP_258410394.1 histidine phosphatase family protein -
  NW981_RS01750 (NW981_01750) - 382558..382941 (-) 384 WP_000868260.1 hypothetical protein -
  NW981_RS01755 (NW981_01755) - 383196..383822 (-) 627 WP_000746687.1 NDxxF motif lipoprotein -

Sequence

Protein


Download         Length: 713 a.a.        Molecular weight: 81290.37 Da        Isoelectric Point: 9.4571

>NTDB_id=619322 NW981_RS01725 WP_258410392.1 376765..378906(+) (comA/nlmT) [Staphylococcus aureus strain 26-G-G]
MSKLKFIEQSDEKDCGPACLAMISSYFGKRVSVAKLRIYCGTDLIGTNIMGMIEGGKRIGLNVEAFEVNELSEIQSGGLP
AIFHIVNDAGLAHYVIVYRIGKNYVYIMDPEKGKYKLKKQDFNHKWTKILMLVSINENFEKKHDKFKTIKSFYFNLLKNN
VPILILIFMFSLLINTVSIFGSFYFQIVIDFIIPSDFIQNLHLLSIGLLFLYLATFLGSLIRYQLTLALGMKISKQMMLG
YYNHVLHLPMSFFSTRKEGEILSRFRDIDNVRNAFSAVTVSIVIDSIMIICGSLVLYFQNSKLFFIVLLMIPIYLMLALF
FKTPYERYNRQAMEADAELSSTIIEGIKGIKIIKSTNSENEFYKKTITKFETFFEKVFKIGMFTNLQLSIKSLMTMTTTL
LIIWFGTYLIMENQLTLGTLLTFNAIVVFFFNSIERLIDVQSLIQSSIVSTRRVMEIQDLDKEEKVGLSKFKFNNSLVIQ
RASFKYGFRNEVIRDIDIEVKKGETIGIVGESGSGKSTLANLLLKYYDISSGKIELDGINYTELSNKSIRMNISYVQQNN
FIFSGTIIENLQIGCSKNYSIDKVIRACKLAEIHEFIMGLSCGYDTILESEGNNLSGGQIQRLGIARAILKDSDVLILDE
PTSALDSNTEKKIINNIKSLNKTTIIISHRLKLTQDCKTILVMKKGKIVERGSHEQLVRKKAHYYSLWESQNG

Nucleotide


Download         Length: 2142 bp        

>NTDB_id=619322 NW981_RS01725 WP_258410392.1 376765..378906(+) (comA/nlmT) [Staphylococcus aureus strain 26-G-G]
ATGTCTAAATTAAAATTTATAGAGCAATCGGACGAGAAAGATTGTGGACCAGCATGTTTGGCGATGATTTCTAGTTATTT
TGGAAAACGGGTTTCCGTAGCTAAACTAAGAATCTATTGTGGAACAGATTTAATAGGAACTAATATAATGGGGATGATTG
AAGGAGGTAAAAGAATTGGCTTAAATGTCGAAGCCTTTGAAGTAAATGAATTAAGTGAGATTCAGAGCGGGGGATTACCA
GCAATATTTCACATAGTTAATGATGCAGGTCTGGCACATTATGTTATTGTATATAGAATTGGGAAAAATTATGTATACAT
TATGGATCCAGAGAAAGGAAAATATAAATTAAAAAAACAAGACTTTAATCATAAATGGACGAAGATTTTAATGTTAGTAT
CGATTAATGAAAACTTCGAAAAAAAACATGATAAATTTAAGACTATAAAATCATTTTATTTTAATCTTTTGAAAAATAAT
GTACCAATTTTGATTTTGATTTTTATGTTTTCTCTATTAATTAATACAGTTAGCATTTTTGGGTCGTTTTATTTTCAAAT
AGTAATTGATTTTATTATACCTTCTGATTTTATACAAAATTTACATTTATTATCAATAGGTTTATTATTTTTATACTTAG
CAACATTTTTGGGGTCACTAATTAGATACCAGTTAACTTTGGCATTAGGAATGAAAATAAGTAAGCAAATGATGTTAGGT
TATTATAATCATGTATTACATCTACCTATGAGTTTTTTTTCAACGAGAAAAGAAGGGGAAATTCTCTCGAGATTTAGAGA
TATTGATAATGTGAGAAATGCATTTTCTGCAGTCACTGTAAGTATTGTTATAGATTCTATAATGATAATATGTGGTTCGT
TAGTTTTATACTTTCAAAATTCAAAGCTATTTTTTATTGTATTACTTATGATACCAATTTACTTAATGCTTGCTTTGTTC
TTCAAAACTCCTTATGAAAGGTATAATCGTCAGGCGATGGAAGCTGATGCAGAATTAAGTTCAACTATTATTGAAGGAAT
TAAAGGTATAAAAATCATAAAAAGTACAAATTCAGAGAACGAATTTTATAAAAAAACAATAACCAAGTTCGAAACATTTT
TTGAGAAAGTGTTCAAAATAGGTATGTTTACCAACTTACAATTATCCATTAAAAGTCTAATGACAATGACAACAACATTA
CTAATTATTTGGTTTGGGACATATTTAATTATGGAAAATCAATTGACTTTAGGGACCTTATTAACTTTCAATGCCATTGT
TGTCTTTTTCTTTAACTCTATTGAAAGATTGATAGATGTACAATCATTAATTCAGTCGTCTATTGTTTCAACAAGACGTG
TTATGGAAATACAGGATTTAGATAAAGAAGAAAAAGTAGGATTGTCTAAATTTAAATTTAATAATTCATTAGTCATTCAA
AGAGCATCTTTTAAATATGGTTTTCGAAATGAAGTTATTCGTGATATTGATATAGAAGTGAAAAAAGGAGAAACTATAGG
AATAGTTGGGGAGAGTGGGTCTGGTAAATCTACTTTGGCAAATTTACTGTTAAAATATTATGATATCTCTTCAGGAAAAA
TTGAGCTTGATGGAATTAACTATACTGAGTTATCTAATAAGTCGATAAGGATGAATATTAGCTATGTACAACAAAATAAT
TTTATATTTAGTGGTACAATAATTGAAAACTTACAAATTGGTTGTTCGAAAAACTATTCGATTGATAAAGTGATAAGAGC
TTGTAAATTAGCAGAAATCCATGAATTTATTATGGGCTTATCTTGCGGATATGATACTATTTTAGAAAGTGAAGGGAACA
ATTTGTCTGGTGGTCAAATACAGAGGTTAGGTATAGCAAGAGCAATACTAAAAGATAGTGATGTATTAATATTAGACGAG
CCTACAAGTGCACTTGATTCAAATACTGAGAAAAAAATTATTAATAACATAAAAAGTTTAAATAAAACCACAATTATTAT
TTCCCATAGGCTGAAATTAACACAGGATTGCAAAACTATTTTAGTTATGAAAAAAGGTAAAATAGTTGAGCGGGGATCTC
ATGAACAATTGGTTAGAAAGAAAGCACATTACTATAGTTTGTGGGAAAGTCAAAATGGATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(494-643)

Peptidase C39 family (Peptidase_C39)

(4-136)

ABC transporter transmembrane region (ABC_membrane)

(164-433)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/nlmT Streptococcus mutans UA159

36.541

100

0.367
  comA Streptococcus mitis NCTC 12261

35.994

100

0.36