Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   SIR_RS18115 Genome accession   NC_022246
Coordinates   1736878..1738149 (-) Length   423 a.a.
NCBI ID   WP_021003245.1    Uniprot ID   T1ZGD3
Organism   Streptococcus intermedius B196     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1731878..1743149
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SIR_RS18100 (SIR_1643) - 1732587..1733891 (-) 1305 WP_021003242.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  SIR_RS18105 (SIR_1644) - 1734093..1734731 (-) 639 WP_021003243.1 hypothetical protein -
  SIR_RS18110 (SIR_1645) - 1734985..1736844 (-) 1860 WP_021003244.1 proline--tRNA ligase -
  SIR_RS18115 (SIR_1646) eeP 1736878..1738149 (-) 1272 WP_021003245.1 RIP metalloprotease RseP Regulator
  SIR_RS18120 (SIR_1647) - 1738301..1739104 (-) 804 WP_020999184.1 phosphatidate cytidylyltransferase -
  SIR_RS18125 (SIR_1648) - 1739113..1739862 (-) 750 WP_003074042.1 isoprenyl transferase -
  SIR_RS18130 (SIR_1649) yajC 1740330..1740668 (-) 339 WP_003074039.1 preprotein translocase subunit YajC -

Sequence

Protein


Download         Length: 423 a.a.        Molecular weight: 45776.57 Da        Isoelectric Point: 9.6561

>NTDB_id=61909 SIR_RS18115 WP_021003245.1 1736878..1738149(-) (eeP) [Streptococcus intermedius B196]
MQAGIIGIVTFIIIFGIIVVVHEFGHFYFAKKSGILVREFSIGMGPKIFAHIGKDGTAYTIRMLPLGGYVRMAGWGEDST
EIKTGTPASLSLNEAGKVIRINLSGKKIDQTALPMNVTSFDLENRLEITGLVLDEQKTYAVDHDATIVEEDGTEIRIAPL
DVQYQNASLGGRLITNFAGPMNNFILGIVAFLLLIFMQGGVADQHTNHVRILQGSALAQAGVKNNDQILKVGQAEIKNWS
DLTQAVQSETKASKGQAELTITVKSGNKIQKLTVKPKKEQGRYLLGVMPGLKSDLPSMIAGGFSMAWNASFRIFAALKNL
IFHPDINKLGGPVAIYKASSDAAKGGLESVIALLAMLSLNIGIFNLIPIPALDGGKIVLNLLEAIRRKPLKQETETYVTL
AGVAVMVVLLIAVTWNDIMRTFF

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=61909 SIR_RS18115 WP_021003245.1 1736878..1738149(-) (eeP) [Streptococcus intermedius B196]
ATGCAAGCAGGTATTATAGGAATCGTTACCTTTATCATTATTTTTGGAATAATCGTTGTTGTTCATGAATTTGGGCATTT
CTATTTTGCGAAAAAATCAGGCATTTTGGTGCGCGAGTTTTCCATTGGAATGGGTCCGAAAATTTTTGCTCATATTGGCA
AAGATGGGACAGCATATACTATTCGGATGTTACCGCTTGGTGGATATGTCCGTATGGCTGGCTGGGGTGAAGACTCAACT
GAGATTAAAACAGGCACACCTGCTAGTTTATCTTTGAATGAAGCAGGAAAGGTTATCCGGATTAATCTTTCAGGCAAGAA
AATCGATCAGACGGCCTTACCGATGAATGTGACGAGTTTTGATTTGGAAAATAGACTTGAAATTACGGGTCTGGTTCTAG
ATGAGCAGAAGACTTATGCAGTCGACCATGATGCAACCATCGTAGAAGAAGATGGAACAGAAATACGCATTGCTCCGCTC
GATGTTCAATATCAAAATGCTAGTTTAGGTGGTCGTCTCATTACCAACTTTGCGGGACCAATGAACAATTTCATTTTGGG
GATTGTAGCTTTTTTGCTGTTGATTTTTATGCAGGGTGGTGTTGCAGATCAACATACAAACCATGTTCGGATTTTACAGG
GTAGTGCCCTAGCTCAAGCCGGTGTAAAAAATAATGACCAAATTTTAAAAGTTGGTCAAGCAGAGATCAAGAATTGGTCA
GATTTGACTCAAGCTGTTCAGTCTGAGACGAAAGCTAGCAAAGGACAGGCAGAACTAACCATAACTGTTAAAAGTGGAAA
TAAAATTCAAAAGCTTACAGTTAAGCCCAAAAAAGAGCAAGGCAGATATTTATTAGGAGTAATGCCAGGCTTGAAGTCGG
ATCTTCCATCGATGATCGCAGGTGGGTTTAGCATGGCTTGGAATGCTAGCTTCCGCATCTTTGCAGCTTTGAAAAATTTG
ATTTTCCACCCAGATATCAATAAATTGGGGGGGCCTGTGGCCATTTACAAAGCTAGTAGTGATGCTGCCAAAGGTGGGCT
TGAAAGTGTTATCGCTCTATTGGCTATGCTTTCTCTAAACATCGGTATTTTTAATCTCATTCCTATTCCCGCACTTGATG
GTGGAAAGATTGTTCTCAACCTTCTTGAAGCCATTCGTCGCAAACCATTAAAGCAGGAGACAGAAACCTATGTCACTTTA
GCAGGTGTTGCTGTTATGGTGGTGCTGTTAATTGCAGTCACGTGGAATGATATTATGCGAACCTTTTTTTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(10-409)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB T1ZGD3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65.072

98.818

0.643
  eeP Streptococcus thermophilus LMD-9

64.833

98.818

0.641

Multiple sequence alignment