Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   LIT28_RS05855 Genome accession   NZ_CP085409
Coordinates   1144808..1145491 (+) Length   227 a.a.
NCBI ID   WP_000350711.1    Uniprot ID   A0A2B0Y2P9
Organism   Bacillus thuringiensis strain KF1     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1139808..1150491
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LIT28_RS05835 (LIT28_05835) - 1140875..1142521 (+) 1647 WP_242250970.1 peptide ABC transporter substrate-binding protein -
  LIT28_RS05840 (LIT28_05840) - 1142549..1142752 (-) 204 WP_000559978.1 hypothetical protein -
  LIT28_RS05845 (LIT28_05845) spx 1143346..1143741 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  LIT28_RS05850 (LIT28_05850) - 1143791..1144465 (-) 675 WP_242250971.1 TerC family protein -
  LIT28_RS05855 (LIT28_05855) mecA 1144808..1145491 (+) 684 WP_000350711.1 adaptor protein MecA Regulator
  LIT28_RS05860 (LIT28_05860) - 1145564..1147108 (+) 1545 WP_063224608.1 cardiolipin synthase -
  LIT28_RS05865 (LIT28_05865) - 1147188..1148432 (+) 1245 WP_242250972.1 competence protein CoiA family protein -
  LIT28_RS05870 (LIT28_05870) pepF 1148484..1150310 (+) 1827 WP_063224606.1 oligoendopeptidase F Regulator

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 26965.02 Da        Isoelectric Point: 3.9986

>NTDB_id=617862 LIT28_RS05855 WP_000350711.1 1144808..1145491(+) (mecA) [Bacillus thuringiensis strain KF1]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQAGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=617862 LIT28_RS05855 WP_000350711.1 1144808..1145491(+) (mecA) [Bacillus thuringiensis strain KF1]
TTGGATATTGAAAGAATCAATGACCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGGTTTAATCG
TGAAGAGATTTGGTACGACCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGATGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGATGGACAAAAGTTAGAACTACCGATAGGTGTAGATAAAATTATAGACATTCCTCTAGATGAAGGTATTGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGCAGGAACAAACTTTAACGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAGGATATAAAAGATGAGCTATAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGATCGTATTTTAAG
TATTGTTTTAGAATACGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2B0Y2P9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.579

100

0.568