Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   LIS83_RS19735 Genome accession   NZ_CP085402
Coordinates   3875032..3875490 (+) Length   152 a.a.
NCBI ID   WP_000804868.1    Uniprot ID   A0A0J1HZV6
Organism   Bacillus anthracis strain CMF9     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3870032..3880490
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LIS83_RS19720 (LIS83_19740) - 3870689..3870925 (+) 237 WP_000283747.1 hypothetical protein -
  LIS83_RS19725 (LIS83_19745) - 3871099..3873207 (-) 2109 WP_000423561.1 polyphosphate kinase -
  LIS83_RS19730 (LIS83_19750) ppx 3873316..3874854 (-) 1539 WP_000658863.1 exopolyphosphatase -
  LIS83_RS19735 (LIS83_19755) kre 3875032..3875490 (+) 459 WP_000804868.1 YkyB family protein Regulator
  LIS83_RS19740 (LIS83_19760) - 3875522..3876184 (-) 663 WP_000922493.1 YkyA family protein -
  LIS83_RS19745 (LIS83_19765) - 3876839..3877480 (-) 642 WP_000680828.1 diguanylate cyclase -
  LIS83_RS19750 (LIS83_19770) - 3877645..3877878 (+) 234 WP_000939450.1 SPP1 phage holin family protein -
  LIS83_RS19755 (LIS83_19775) - 3877910..3878410 (-) 501 WP_000708179.1 hypothetical protein -
  LIS83_RS19760 (LIS83_19780) - 3878836..3880377 (+) 1542 WP_000445735.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17787.52 Da        Isoelectric Point: 10.6793

>NTDB_id=617776 LIS83_RS19735 WP_000804868.1 3875032..3875490(+) (kre) [Bacillus anthracis strain CMF9]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=617776 LIS83_RS19735 WP_000804868.1 3875032..3875490(+) (kre) [Bacillus anthracis strain CMF9]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAGTATTTATACTGGTTAAAAAAAACAGCTTTAGAACGCTTAATTACTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTCTCAAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGTGATTACTTTTTCCATATTCCTCCTACAAAAGAAGATTTTCGAATCCTACCACATCTCGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCGCTAAAAC
AAGAAAAAAAATTAAGTGAACCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0J1HZV6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493