Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   LIS81_RS06105 Genome accession   NZ_CP085399
Coordinates   1185160..1185843 (+) Length   227 a.a.
NCBI ID   WP_000350710.1    Uniprot ID   Q81TR3
Organism   Bacillus tropicus strain CK18     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1180160..1190843
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LIS81_RS06085 (LIS81_06090) - 1181231..1182877 (+) 1647 WP_000728623.1 peptide ABC transporter substrate-binding protein -
  LIS81_RS06090 (LIS81_06095) - 1182903..1183106 (-) 204 WP_000559976.1 hypothetical protein -
  LIS81_RS06095 (LIS81_06100) spx 1183700..1184095 (+) 396 WP_002011348.1 transcriptional regulator Spx -
  LIS81_RS06100 (LIS81_06105) - 1184145..1184819 (-) 675 WP_000362614.1 TerC family protein -
  LIS81_RS06105 (LIS81_06110) mecA 1185160..1185843 (+) 684 WP_000350710.1 adaptor protein MecA Regulator
  LIS81_RS06110 (LIS81_06115) - 1185916..1187460 (+) 1545 WP_000799204.1 cardiolipin synthase -
  LIS81_RS06115 (LIS81_06120) - 1187541..1188785 (+) 1245 WP_226639999.1 competence protein CoiA family protein -
  LIS81_RS06120 (LIS81_06125) pepF 1188836..1190662 (+) 1827 WP_252211001.1 oligoendopeptidase F Regulator

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 26966.00 Da        Isoelectric Point: 3.9822

>NTDB_id=617718 LIS81_RS06105 WP_000350710.1 1185160..1185843(+) (mecA) [Bacillus tropicus strain CK18]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQAGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=617718 LIS81_RS06105 WP_000350710.1 1185160..1185843(+) (mecA) [Bacillus tropicus strain CK18]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGACAGAGGCTTTAATCG
TGAGGAAATTTGGTATGACCGCGAAAGAAGCGAAGAGCTCTTTTGGGAAATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCAGAACTT
TCAAAGGATGGACAAAAGCTAGAACTACCGATAGGTGTAGATAAAATTATAGACATTCCTTTAGATGAAGGCATTGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGCAGGTACAAACTTTAACGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCCTTAAGCCACCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGACCGCATTTTAAG
TATTGTTTTAGAATACGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGGAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACAATTCGCAATAATTTTCCTGCTAAAACGTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q81TR3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.14

100

0.564