Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LIS81_RS06020 Genome accession   NZ_CP085399
Coordinates   1166615..1166791 (+) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus tropicus strain CK18     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1161615..1171791
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LIS81_RS06000 (LIS81_06005) clpC 1161948..1164548 (+) 2601 WP_226639996.1 ATP-dependent chaperone ClpB Regulator
  LIS81_RS06005 (LIS81_06010) - 1164586..1164768 (-) 183 WP_001211116.1 YjzD family protein -
  LIS81_RS06010 (LIS81_06015) - 1164925..1165659 (+) 735 WP_000028705.1 hypothetical protein -
  LIS81_RS06015 (LIS81_06020) - 1165689..1166561 (+) 873 WP_000486163.1 NAD(P)-dependent oxidoreductase -
  LIS81_RS06020 (LIS81_06025) comZ 1166615..1166791 (+) 177 WP_009879752.1 ComZ family protein Regulator
  LIS81_RS06025 (LIS81_06030) fabH 1167210..1168142 (+) 933 WP_001100541.1 beta-ketoacyl-ACP synthase III -
  LIS81_RS06030 (LIS81_06035) fabF 1168174..1169412 (+) 1239 WP_252210998.1 beta-ketoacyl-ACP synthase II -
  LIS81_RS06035 (LIS81_06040) - 1169519..1170307 (+) 789 WP_000539322.1 DUF2268 domain-containing putative Zn-dependent protease -
  LIS81_RS06040 (LIS81_06045) - 1170451..1171197 (+) 747 WP_029437838.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=617715 LIS81_RS06020 WP_009879752.1 1166615..1166791(+) (comZ) [Bacillus tropicus strain CK18]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=617715 LIS81_RS06020 WP_009879752.1 1166615..1166791(+) (comZ) [Bacillus tropicus strain CK18]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCTCAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGAA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586