NTDB

Overview

Name	clpC	Type	Regulator
Locus tag	LIS81_RS06000	Genome accession	NZ_CP085399
Coordinates	1161948..1164548 (+)	Length	866 a.a.
NCBI ID	WP_226639996.1	Uniprot ID	-
Organism	Bacillus tropicus strain CK18
Function	degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1156948..1169548

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIS81_RS05965 (LIS81_05970)	prsA	1157712..1158569 (-)	858	WP_226639995.1	peptidylprolyl isomerase PrsA	-
LIS81_RS05970 (LIS81_05975)	-	1158699..1158830 (-)	132	WP_001120845.1	DUF3941 domain-containing protein	-
LIS81_RS05975 (LIS81_05980)	-	1158931..1159788 (+)	858	WP_000364426.1	YitT family protein	-
LIS81_RS05980 (LIS81_05985)	-	1159814..1160011 (-)	198	WP_000527392.1	DUF3813 domain-containing protein	-
LIS81_RS05985 (LIS81_05990)	-	1160012..1160152 (-)	141	WP_000516816.1	hypothetical protein	-
LIS81_RS05990 (LIS81_05995)	-	1160258..1161067 (-)	810	WP_001041235.1	Cof-type HAD-IIB family hydrolase	-
LIS81_RS05995 (LIS81_06000)	-	1161559..1161738 (+)	180	WP_000531421.1	YjzC family protein	-
LIS81_RS06000 (LIS81_06005)	clpC	1161948..1164548 (+)	2601	WP_226639996.1	ATP-dependent chaperone ClpB	Regulator
LIS81_RS06005 (LIS81_06010)	-	1164586..1164768 (-)	183	WP_001211116.1	YjzD family protein	-
LIS81_RS06010 (LIS81_06015)	-	1164925..1165659 (+)	735	WP_000028705.1	hypothetical protein	-
LIS81_RS06015 (LIS81_06020)	-	1165689..1166561 (+)	873	WP_000486163.1	NAD(P)-dependent oxidoreductase	-
LIS81_RS06020 (LIS81_06025)	comZ	1166615..1166791 (+)	177	WP_009879752.1	ComZ family protein	Regulator
LIS81_RS06025 (LIS81_06030)	fabH	1167210..1168142 (+)	933	WP_001100541.1	beta-ketoacyl-ACP synthase III	-
LIS81_RS06030 (LIS81_06035)	fabF	1168174..1169412 (+)	1239	WP_252210998.1	beta-ketoacyl-ACP synthase II	-

Sequence

Protein

Download Length: 866 a.a. Molecular weight: 97568.55 Da Isoelectric Point: 5.0856

                                >NTDB_id=617714 LIS81_RS06000 WP_226639996.1 1161948..1164548(+) (clpC) [Bacillus tropicus strain CK18]

MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEALKQGAENLIKKKPSVTGSGAE

AGKLYITGALQQLLVRAGKEAEKLQDDYISIEHVLLAFTEEKGDINQLFTRFHITKDNLLQSLMTVRGNQRVTSQNPEAT

YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI

FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD

EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA

CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE

HLERLRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG

EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM

SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI

IMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHIT

VELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVYVK

Nucleotide

Download Length: 2601 bp

                                >NTDB_id=617714 LIS81_RS06000 WP_226639996.1 1161948..1164548(+) (clpC) [Bacillus tropicus strain CK18]

ATGGACTTAAATCAAATGACAACAAAAACACAAGAGGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCATCATCA

AGAAGTAGATACTGTTCATCTCTTGTTTACATTATTAGAAGAGCAAGATGGGTTAGCAGTACGTATTTTTCAAAAAATGA

ATGTCGATATAGAAGCGTTAAAACAAGGCGCCGAAAATTTAATTAAGAAAAAGCCTTCCGTAACGGGAAGCGGTGCAGAA

GCAGGTAAATTATATATAACAGGTGCTCTGCAACAATTACTTGTAAGAGCGGGAAAAGAAGCAGAGAAATTGCAAGATGA

CTACATTTCAATTGAACATGTATTGCTTGCTTTTACTGAAGAAAAAGGCGATATAAATCAATTATTTACAAGATTTCATA

TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACTAGTCAAAATCCAGAAGCAACT

TATGAAGCGTTAGAAAAATATGGTCGTGATTTAGTGGCGGAAGTAAGAGCGGGGAAAATTGACCCTGTTATTGGCCGCGA

TAGTGAAATTCGCCGCGTAATCCGTATTCTTTCACGTAAAACGAAAAACAACCCGGTTTTAATTGGGGAACCAGGTGTAG

GTAAAACAGCAATCGTTGAAGGATTAGCACAGCGTATTGTGAAAAAGGACGTACCAGAAGGATTAAAAGATAGAACAATT

TTTGCGTTAGATATGAGTGCGCTTGTAGCCGGTGCGAAATTCCGCGGTGAGTTTGAGGAGCGTCTCCAAGCTGTATTAAA

TGAAATTAAAAAGAGTGAAGGTCGTATTTTACTATTCATTGATGAACTTCACACAATCGTCGGCGCTGGTAAAACAGAAG

GCGCAATGGATGCAGGAAATATGTTAAAACCGATGCTTGCGCGTGGTGAACTGCATTGTATCGGGGCGACGACGTTAGAT

GAATATCGTAAATATATTGAGAAAGATCCAGCGCTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAACCAACTGTTGA

AGATACAATTTCCATTTTACGTGGTTTAAAAGAGCGCTTTGAAATTTATCACGGTGTAAATATTCATGACCGCGCGATTG

TAGCAGCATCAGTTTTATCAGATCGATATATTTCGGATCGTTTCTTACCGGATAAAGCCATTGATCTTGTTGACGAAGCG

TGCGCAACAATTCGTACAGAAATTGATTCTATGCCAACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGCTGGAAAT

TGAAGAAGCAGCTCTTGGAAAAGAGAAAGACTTTGGTAGCCAAGAACGTCTAAAAACATTGCAACGTGAATTATCGGATT

TAAAAGAAGTGGCAAGTGGCATGAGAGCCAAATGGGAGAAAGAAAAAGAAGATATTCACAAAGTTCGTGACTTACGTGAA

CATTTAGAGCGTCTGCGCCGTGAATTAGAAGAAGCAGAAGGTAATTACGACTTAAATAGAGCAGCGGAACTTCGCCACGG

AAAAATTCCTGCAATTGAAAAAGAGTTAAAAGAAGCAGAAGAAATGGGCGCGAATAATAAACAAGAAAATCGTTTATTAC

GTGAGGAAGTAAGTGAAGAAGAGATTGCTGATATTGTTTCACGCTGGACTGGTATTCCTGTCGCAAAACTCGTTGAAGGT

GAACGTGAGAAATTATTACGATTAGAGCAAATTTTATCAGAGCGTGTTATCGGACAAGAAGAAGCGGTAAGCCTAGTATC

AGACGCAGTTCTTCGTGCTCGTGCTGGTATTAAAGACCCGAACCGTCCAATTGGTTCCTTCATCTTCTTAGGACCGACTG

GTGTTGGTAAAACAGAACTTGCAAAAACGTTGGCGCAGTCTTTATTTGATAGTGAAGAGCAAATGATTCGTATTGATATG

TCTGAGTACATGGAGAAACACGCTGTGTCACGCTTAATTGGTGCACCTCCTGGATATGTTGGATATGAAGAGGGCGGTCA

ATTAACAGAAGCAGTAAGACGTAAACCGTATTCTGTTATTTTGTTAGATGAAATCGAAAAAGCACATCCAGAAGTATTCA

ACATTTTATTACAAATGTTAGATGACGGACGCATTACAGATTCGCAAGGACGTACAGTAGACTTTAAAAACACAGTTATT

ATTATGACGTCAAATATTGGATCTGCTCATTTATTAGATGGATTAGAAGAAGATGGCTCAATTAAAGAGGAATCAAGAGA

ACTTGTCATGGGGCAATTAAGAGGACATTTCCGACCAGAGTTTTTAAATCGTGTCGACGAAATTATTTTATTCAAACCTC

TTACAACGAATGAAATTAAAGGTATTGTTGATAAAATTGTAAAAGAATTACAAGGCCGTTTAGCTGACCGTCATATTACG

GTAGAATTAACAGACGCAGCGAAAGAGTTTGTTGTCGAAGCTGGCTTCGATCCAATGTACGGAGCTCGTCCGTTAAAACG

ATATGTGCAGCGTCAAGTTGAGACGAAATTAGCGAGAGAATTAATTGCAGGAACGATTACTGACAATAGTCATGTAGTTG

TTGATGTAGAAAATAACGAATTAGTCGTTTATGTGAAGTAA