Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   LIT38_RS07515 Genome accession   NZ_CP085394
Coordinates   1445437..1446099 (+) Length   220 a.a.
NCBI ID   WP_252217481.1    Uniprot ID   -
Organism   Bacillus sp. CMF12     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1440437..1451099
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LIT38_RS07490 (LIT38_07505) - 1440489..1441424 (+) 936 WP_243508102.1 ATP-binding cassette domain-containing protein -
  LIT38_RS07495 (LIT38_07510) - 1441824..1443029 (+) 1206 WP_243508103.1 putative glycoside hydrolase -
  LIT38_RS07500 (LIT38_07515) - 1443145..1443333 (-) 189 WP_159868752.1 hypothetical protein -
  LIT38_RS07505 (LIT38_07520) - 1443580..1444155 (+) 576 WP_243508104.1 GNAT family N-acetyltransferase -
  LIT38_RS07510 (LIT38_07525) spxA 1444630..1445025 (+) 396 WP_009331204.1 transcriptional regulator SpxA -
  LIT38_RS07515 (LIT38_07530) mecA 1445437..1446099 (+) 663 WP_252217481.1 adaptor protein MecA Regulator
  LIT38_RS07520 (LIT38_07535) - 1446300..1447493 (+) 1194 WP_252217483.1 competence protein CoiA family protein -
  LIT38_RS07525 (LIT38_07540) pepF 1447612..1449429 (+) 1818 WP_243508107.1 oligoendopeptidase F Regulator
  LIT38_RS07530 (LIT38_07545) - 1450131..1451006 (-) 876 WP_252217484.1 ClpXP adapter SpxH family protein -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 26350.44 Da        Isoelectric Point: 4.1032

>NTDB_id=617506 LIT38_RS07515 WP_252217481.1 1445437..1446099(+) (mecA) [Bacillus sp. CMF12]
MEIERINDHTVKFYISYLDIEERGFDREEIWYNRERSEELFWEMMDEVHQEEEFLVEGPLWIQVQALDKGLEVLVTKAQL
SKDGQKFELPVPDEKVKDLPVDEHIEEMLDHHFRKSDDDDPGYEGDLEFLLSFKDFEDVISLSKQSILDSITTKLYSFEG
KYYLFAEFPDELFEEDDIDNMLSILLEYGHETSTTIHRVMEYGKLIIENDVFENLRKHFK

Nucleotide


Download         Length: 663 bp        

>NTDB_id=617506 LIT38_RS07515 WP_252217481.1 1445437..1446099(+) (mecA) [Bacillus sp. CMF12]
ATGGAAATCGAACGTATTAATGATCATACAGTTAAATTTTATATTTCTTATCTTGATATAGAAGAAAGAGGCTTTGACCG
TGAAGAGATTTGGTACAATCGTGAGCGGAGTGAGGAACTCTTTTGGGAAATGATGGATGAAGTCCATCAGGAGGAAGAAT
TTCTTGTTGAAGGACCTTTATGGATTCAGGTTCAGGCATTGGATAAGGGTCTGGAGGTTCTTGTAACAAAGGCTCAGCTT
TCAAAGGATGGCCAGAAGTTTGAACTTCCTGTCCCGGATGAAAAAGTGAAAGATTTGCCTGTGGATGAACATATAGAGGA
AATGCTTGATCATCATTTCCGTAAATCCGATGATGATGATCCTGGATATGAAGGAGATCTCGAGTTCTTATTATCATTTA
AAGATTTTGAAGACGTTATTTCATTATCAAAGCAGTCAATTCTTGATTCCATTACTACAAAGTTATATTCCTTTGAAGGG
AAGTATTATTTATTCGCAGAGTTCCCTGATGAGCTTTTTGAAGAGGATGACATAGATAACATGCTAAGTATTCTCCTGGA
GTACGGGCACGAAACGAGCACAACTATTCACCGTGTAATGGAATACGGTAAATTGATTATAGAAAATGATGTTTTTGAAA
ATCTGAGAAAACATTTTAAGTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

63.348

100

0.636