Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   SAIN_RS02190 Genome accession   NC_022244
Coordinates   438352..439407 (+) Length   351 a.a.
NCBI ID   WP_021001375.1    Uniprot ID   -
Organism   Streptococcus anginosus C1051     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 433352..444407
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAIN_RS02160 (SAIN_0422) - 433872..434507 (-) 636 WP_021001372.1 YigZ family protein -
  SAIN_RS02165 (SAIN_0423) comFA/cflA 434564..435865 (+) 1302 WP_021001373.1 DEAD/DEAH box helicase Machinery gene
  SAIN_RS02170 (SAIN_0424) - 435862..436527 (+) 666 WP_003025757.1 ComF family protein -
  SAIN_RS02175 (SAIN_0425) hpf 436606..437148 (+) 543 WP_003025754.1 ribosome hibernation-promoting factor, HPF/YfiA family -
  SAIN_RS02180 (SAIN_0426) rsmD 437336..437884 (+) 549 WP_025271932.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  SAIN_RS02185 (SAIN_0427) coaD 437874..438371 (+) 498 WP_021001374.1 pantetheine-phosphate adenylyltransferase -
  SAIN_RS02190 (SAIN_0428) sepM 438352..439407 (+) 1056 WP_021001375.1 SepM family pheromone-processing serine protease Regulator
  SAIN_RS02195 (SAIN_0429) - 439545..440111 (+) 567 WP_021001376.1 YutD family protein -
  SAIN_RS02200 (SAIN_0430) rlmN 440145..441227 (+) 1083 WP_021001377.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  SAIN_RS02205 (SAIN_0431) - 441220..441750 (+) 531 WP_003025737.1 VanZ family protein -
  SAIN_RS02210 (SAIN_0432) trpB 442135..443331 (+) 1197 WP_021001378.1 tryptophan synthase subunit beta -
  SAIN_RS02215 (SAIN_0433) cclA/cilC 443501..444160 (-) 660 WP_021001379.1 prepilin peptidase Machinery gene

Sequence


Protein


Download         Length: 351 a.a.        Molecular weight: 38338.29 Da        Isoelectric Point: 10.1906

>NTDB_id=61750 SAIN_RS02190 WP_021001375.1 438352..439407(+) (sepM) [Streptococcus anginosus C1051]
MEKPRNKFKKWPIIAVVGLILLFLSFVVPLPYYIEVPGGAADVRQVLRVDNKEDKEKGSYNFVTVGIQHATFAHLVYAWL
TPFTDIYSAKDLTGGTSDKEYMRINQFYMETSQNLAKYQGLKKAGKDITLKYLGVYVLQVTKNSTFKGILNIADTVTGVN
DKTFNSSKELIDYVGAQKIGSKVKVNYVEDGQKKSATGKIIKLENGKNGIGISLIDRTEVTSNTPIEFSTAGIGGPSAGL
MFSLAIYTQIADPTLRDGRNIAGTGSIDREGKVGDIGGIDKKVVSAAKNGAEIFFAPNNPVTKEVKKSNPKAKTNYETAL
AAAKKIKTKMKIVPVKTLQDAIDYLKSTKKS

Nucleotide


Download         Length: 1056 bp        

>NTDB_id=61750 SAIN_RS02190 WP_021001375.1 438352..439407(+) (sepM) [Streptococcus anginosus C1051]
ATGGAAAAACCAAGAAATAAATTTAAAAAATGGCCGATAATTGCAGTAGTAGGGTTGATTTTGCTTTTCTTATCTTTTGT
AGTTCCCTTGCCTTATTATATTGAGGTGCCAGGTGGTGCAGCGGATGTCCGTCAGGTATTGCGCGTGGACAACAAAGAAG
ATAAGGAAAAAGGTTCTTATAATTTTGTAACGGTTGGAATTCAGCATGCGACCTTCGCTCATTTGGTTTATGCTTGGCTG
ACACCTTTTACGGATATTTATTCGGCGAAGGATTTGACTGGTGGAACTTCTGATAAAGAATACATGCGGATCAATCAGTT
TTATATGGAAACGTCGCAAAACCTAGCTAAATACCAAGGGTTGAAAAAAGCTGGCAAAGACATTACTCTGAAATATCTAG
GGGTTTACGTCTTGCAAGTCACAAAGAATTCTACTTTTAAAGGTATTTTAAATATTGCAGATACCGTGACAGGTGTGAAT
GATAAGACTTTCAATAGTTCAAAAGAATTGATAGACTATGTCGGAGCGCAAAAGATTGGCAGCAAGGTCAAGGTGAACTA
TGTAGAAGACGGTCAGAAGAAATCTGCTACAGGTAAAATTATTAAACTTGAAAATGGAAAAAACGGGATTGGTATTAGCT
TGATCGACCGAACAGAAGTCACAAGCAACACACCAATTGAATTTTCAACAGCCGGTATTGGTGGACCAAGTGCGGGCTTG
ATGTTTAGTTTGGCAATTTATACGCAAATTGCAGATCCAACATTGAGAGACGGCAGAAATATTGCTGGGACGGGCTCAAT
TGACCGCGAAGGAAAAGTTGGCGACATTGGTGGGATTGACAAAAAAGTTGTTTCAGCAGCTAAAAATGGCGCAGAAATTT
TCTTTGCGCCAAATAATCCAGTCACCAAGGAAGTGAAAAAATCCAATCCTAAAGCGAAAACAAACTATGAGACAGCTTTG
GCAGCTGCTAAAAAAATTAAAACTAAAATGAAAATTGTACCTGTCAAGACCTTGCAAGACGCAATTGATTACCTCAAGAG
CACAAAAAAGTCGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

64.516

97.151

0.627


Multiple sequence alignment