Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   LI911_RS02105 Genome accession   NZ_CP085318
Coordinates   390281..390967 (+) Length   228 a.a.
NCBI ID   WP_001793467.1    Uniprot ID   A0A641AAY3
Organism   Staphylococcus aureus strain CKFA-361     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 385281..395967
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LI911_RS02070 yqeH 385808..386908 (+) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -
  LI911_RS02075 aroE 386922..387728 (+) 807 WP_000666748.1 shikimate dehydrogenase -
  LI911_RS02080 yhbY 387732..388022 (+) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  LI911_RS02085 nadD 388025..388594 (+) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  LI911_RS02090 yqeK 388584..389168 (+) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  LI911_RS02095 rsfS 389169..389522 (+) 354 WP_001088022.1 ribosome silencing factor -
  LI911_RS02100 - 389525..390241 (+) 717 WP_000084829.1 class I SAM-dependent DNA methyltransferase -
  LI911_RS02105 comEA 390281..390967 (+) 687 WP_001793467.1 ComEA family DNA-binding protein Machinery gene
  LI911_RS02110 - 391059..391520 (+) 462 WP_000439693.1 ComE operon protein 2 -
  LI911_RS02115 comEC 391525..393726 (+) 2202 WP_323147755.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  LI911_RS02120 holA 393783..394757 (+) 975 WP_001282568.1 DNA polymerase III subunit delta -
  LI911_RS02125 rpsT 394802..395053 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25786.50 Da        Isoelectric Point: 9.6753

>NTDB_id=617139 LI911_RS02105 WP_001793467.1 390281..390967(+) (comEA) [Staphylococcus aureus strain CKFA-361]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDNALKQSTSENSSLSKVEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIGVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=617139 LI911_RS02105 WP_001793467.1 390281..390967(+) (comEA) [Staphylococcus aureus strain CKFA-361]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATAATG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAAGTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAGGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGGAGTAAACAGTGTGCATGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A641AAY3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

100

100

1
  comEA Staphylococcus aureus N315

97.368

100

0.974