Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   LJA38_RS14680 Genome accession   NZ_CP085283
Coordinates   3025027..3027318 (-) Length   763 a.a.
NCBI ID   WP_101312053.1    Uniprot ID   -
Organism   Bacillus velezensis strain TPS3N     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3020027..3032318
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LJA38_RS14640 - 3020487..3020918 (+) 432 WP_003152066.1 Na(+)/H(+) antiporter subunit B -
  LJA38_RS14645 - 3020918..3021259 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  LJA38_RS14650 - 3021252..3022733 (+) 1482 WP_014305717.1 Na+/H+ antiporter subunit D -
  LJA38_RS14655 - 3022739..3023215 (+) 477 WP_063174636.1 Na+/H+ antiporter subunit E -
  LJA38_RS14660 - 3023215..3023499 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  LJA38_RS14665 mnhG 3023483..3023857 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  LJA38_RS14670 - 3023897..3024280 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  LJA38_RS14675 comA 3024302..3024946 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  LJA38_RS14680 comP 3025027..3027318 (-) 2292 WP_101312053.1 histidine kinase Regulator
  LJA38_RS14685 comX 3027330..3027494 (-) 165 WP_007613432.1 competence pheromone ComX -
  LJA38_RS14690 - 3027494..3028372 (-) 879 WP_024085740.1 polyprenyl synthetase family protein -
  LJA38_RS14695 degQ 3028557..3028697 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  LJA38_RS14700 - 3029163..3029504 (+) 342 WP_014305721.1 hypothetical protein -
  LJA38_RS14705 - 3029511..3030731 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 763 a.a.        Molecular weight: 88361.61 Da        Isoelectric Point: 7.7860

>NTDB_id=616995 LJA38_RS14680 WP_101312053.1 3025027..3027318(-) (comP) [Bacillus velezensis strain TPS3N]
MKSKYNKISVVLILLTLVYVIYLTYISTNNLLVGATISENKQGEIKIKDVEDFTMAYYAGVQKGDIVKNINGQNVKSINI
QMNKLKNVNSMVVDRNGHDIEIKLNLFNDRNFSTYLIPIIFYVVCLFCCFFIIKINEEKNLKSALVLIVFLLSASIAYIS
AGGSAKGDLLSRCIMLLTLITVPLNYLLFLYHYFKELGTVLFSKKVFVLYLFPTINILFELFRSRLSFGDFIPKFNLISF
FLLFLVVAYYFIVILRRNKDTDQAHIIKVLVVINILAFSPFLCLYLIPYVFFNDYYVSSFLTASFMLLIPFSLVYQFMSN
KIYNVDFILSKLKYYGFLALTPTIILVTTIELLREPEENFYNLKLTFLIYILMLAVFYYKEILDFRFKLKRVSERFNYQD
SIYKFTQLIRNSSSLNQVFGELKTTILEVTLTSKVYIFEVTYDGNVKAFDERDSSLIDDYQVLLNSVTVEIGKITEFNQG
FAMKVGERGDRSFVVLCLSKMNTPRLSREEISWLKTLSFYVNVSIENVMKIEKLMNHLEDLKKQETNPVWLKKLMFTIEE
KQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGLVKA
VSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGCNQE
EGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2292 bp        

>NTDB_id=616995 LJA38_RS14680 WP_101312053.1 3025027..3027318(-) (comP) [Bacillus velezensis strain TPS3N]
ATGAAGTCCAAGTACAATAAGATTTCAGTTGTCTTAATTCTGCTTACATTGGTATATGTCATTTATCTGACTTATATAAG
CACAAATAATCTTTTAGTCGGCGCCACCATTTCTGAAAATAAACAGGGCGAAATTAAAATAAAAGATGTAGAAGATTTTA
CAATGGCATATTACGCCGGAGTGCAAAAGGGAGATATAGTAAAGAATATTAACGGCCAAAATGTAAAGTCAATTAATATT
CAAATGAATAAGCTGAAAAATGTAAACTCGATGGTCGTTGATAGAAACGGTCATGATATTGAGATTAAGCTCAATTTATT
TAATGATAGGAACTTCAGTACTTACTTAATACCGATAATTTTTTATGTAGTATGTTTATTTTGCTGCTTCTTCATCATCA
AGATAAATGAAGAAAAAAACTTGAAATCTGCTTTGGTGCTAATTGTATTTCTTTTGTCTGCTTCAATCGCATATATCAGT
GCTGGAGGATCGGCAAAAGGCGATTTGCTTAGCAGATGCATCATGTTGTTAACATTAATAACTGTACCTTTAAATTATCT
TCTGTTTCTTTATCATTACTTTAAAGAATTAGGTACTGTGCTTTTCAGCAAAAAAGTTTTTGTTTTGTATTTATTTCCAA
CTATAAATATATTATTTGAATTATTTCGGTCGCGATTATCTTTTGGTGATTTTATTCCAAAATTTAATTTGATTTCGTTT
TTTCTTCTTTTTTTGGTTGTAGCATATTACTTTATTGTTATTTTGAGAAGAAACAAAGATACTGACCAGGCACATATTAT
AAAGGTGCTTGTGGTTATAAATATATTGGCATTTTCGCCTTTTTTATGTCTGTATCTTATACCGTATGTATTTTTTAATG
ATTATTATGTCTCTTCTTTCTTAACAGCATCATTTATGCTGCTGATACCTTTTTCACTTGTATATCAATTCATGTCGAAT
AAAATATATAACGTTGATTTTATCTTAAGTAAGTTAAAATATTACGGCTTTTTAGCGTTAACCCCAACTATAATTCTGGT
TACGACAATTGAGTTATTACGTGAGCCGGAAGAAAATTTTTACAATCTTAAACTGACATTTTTAATTTATATTTTAATGT
TAGCTGTTTTTTATTATAAAGAAATACTCGATTTCCGGTTTAAATTAAAAAGGGTCTCTGAAAGATTCAATTACCAAGAC
AGTATTTATAAGTTTACCCAATTAATCAGAAACTCGTCTTCTTTAAATCAGGTTTTTGGAGAATTAAAAACCACCATTCT
CGAAGTCACTCTTACAAGTAAAGTGTATATATTTGAAGTTACGTATGATGGGAATGTAAAGGCATTTGACGAAAGAGATT
CAAGTTTGATAGATGATTATCAAGTGCTTTTAAATAGTGTTACTGTTGAAATAGGAAAAATAACGGAGTTTAATCAAGGT
TTCGCAATGAAAGTAGGAGAACGGGGAGATAGATCATTCGTTGTTCTCTGTTTGTCTAAGATGAATACGCCCCGTTTATC
ACGTGAAGAAATTTCTTGGTTAAAAACATTATCTTTTTACGTTAATGTTTCAATAGAAAACGTGATGAAAATTGAAAAAC
TTATGAATCACCTCGAAGATTTAAAGAAACAGGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACGATCGAGGAA
AAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGATTTGATTTCTTTGAAGCGCCAGTGTGAGCT
GTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGATGT
CGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGTCTGGTCAAGGCG
GTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTACGGCGGCGCT
GGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCACAGGCGAATG
AGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGCTGCAATCAGGAA
GAAGGCGGCGGACAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGGACGGATGAAAAT
CGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(563-632)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.896

100

0.544