Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   NUU08_RS02195 Genome accession   NZ_CP102522
Coordinates   425677..426459 (+) Length   260 a.a.
NCBI ID   WP_003131572.1    Uniprot ID   -
Organism   Lactococcus lactis strain R-707-1     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 420677..431459
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NUU08_RS02170 (NUU08_02170) vicX 420700..421512 (-) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator
  NUU08_RS02175 (NUU08_02175) vicK 421683..423125 (-) 1443 WP_014570382.1 cell wall metabolism sensor histidine kinase WalK Regulator
  NUU08_RS02180 (NUU08_02180) yycF 423118..423819 (-) 702 WP_003131580.1 response regulator YycF -
  NUU08_RS02185 (NUU08_02185) tmk 423997..424632 (+) 636 WP_003131575.1 dTMP kinase -
  NUU08_RS02190 (NUU08_02190) - 424765..425625 (+) 861 WP_003131573.1 DNA polymerase III subunit delta' -
  NUU08_RS02195 (NUU08_02195) yaaT 425677..426459 (+) 783 WP_003131572.1 stage 0 sporulation family protein Regulator
  NUU08_RS02200 (NUU08_02200) yabA 426452..426778 (+) 327 WP_003131570.1 DNA replication initiation control protein YabA -
  NUU08_RS02205 (NUU08_02205) rsmI 426778..427653 (+) 876 WP_010905318.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  NUU08_RS02210 (NUU08_02210) - 427730..427921 (-) 192 WP_003131566.1 hypothetical protein -
  NUU08_RS02215 (NUU08_02215) mvk 427984..428916 (-) 933 WP_003131564.1 mevalonate kinase -
  NUU08_RS02220 (NUU08_02220) mvaD 429222..430178 (+) 957 WP_010905319.1 diphosphomevalonate decarboxylase -
  NUU08_RS02225 (NUU08_02225) - 430165..431154 (+) 990 WP_058221589.1 mevalonate kinase -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29804.21 Da        Isoelectric Point: 5.4775

>NTDB_id=616994 NUU08_RS02195 WP_003131572.1 425677..426459(+) (yaaT) [Lactococcus lactis strain R-707-1]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLEIHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRQLVIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNELNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=616994 NUU08_RS02195 WP_003131572.1 425677..426459(+) (yaaT) [Lactococcus lactis strain R-707-1]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCGAATCTTGAAATTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTGTCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTTGCTTATAATTTCGACCAAATGCA
ACTTTTTATTTCGTTTACAGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCTAAAATTCATGGTGGACTTGGACCTTGTGGACGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATGA
ATTGAACGGTCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACCTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

45.662

84.231

0.385