Detailed information NTG0616852

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: JIX56_RS31090
• Genome accession: NZ_CP102512
• Coordinates: 7102878..7104164 (+)
• Length: 428 a.a.
• NCBI ID: WP_257551229.1
• Uniprot ID: -
• Organism: Streptomyces sp. CA-210063
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7097878..7109164

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JIX56_RS31060 (JIX56_31060)	-	7098607..7098801 (+)	195	WP_033526477.1	hypothetical protein	-
JIX56_RS31075 (JIX56_31075)	tig	7099435..7100835 (+)	1401	WP_257545380.1	trigger factor	-
JIX56_RS31080 (JIX56_31080)	clpP	7101238..7101846 (+)	609	WP_257551227.1	ATP-dependent Clp protease proteolytic subunit	Regulator
JIX56_RS31085 (JIX56_31085)	clpP	7101993..7102673 (+)	681	WP_257545382.1	ATP-dependent Clp protease proteolytic subunit	Regulator
JIX56_RS31090 (JIX56_31090)	clpX	7102878..7104164 (+)	1287	WP_257551229.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
JIX56_RS31095 (JIX56_31095)	-	7104377..7104661 (+)	285	WP_257545384.1	hypothetical protein	-
JIX56_RS31100 (JIX56_31100)	-	7104754..7105713 (-)	960	WP_257545386.1	hypothetical protein	-
JIX56_RS31105 (JIX56_31105)	-	7105850..7108480 (+)	2631	WP_257545388.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46911.74 Da
• Isoelectric Point: 4.8277

>NTDB_id=616852 JIX56_RS31090 WP_257551229.1 7102878..7104164(+) (clpX) [Streptomyces sp. CA-210063]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENSGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKRELQSKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVHSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=616852 JIX56_RS31090 WP_257551229.1 7102878..7104164(+) (clpX) [Streptomyces sp. CA-210063]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCA
GCGAGGTCCGCTGGGAGGAGCTCCCGAAGCCCCGGGAGATCTACGAGTTCCTCGAGGGCTACGTGGTGGGCCAGGAGGCG
GCCAAGAAGGCCCTCTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACAGCGGCGGTCAGAGCCG
TGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACCCTCCTCGCCCAGA
CCCTCGCGCGCATGCTGAACGTGCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCGGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGTTGAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAAGCCGAAACGGGCATCATCTACATCGA
TGAGATCGACAAGGTCGCGAGGAAGAGTGAAAACCCCTCCATCACCCGCGACGTCTCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAAGGCACGACGGCGTCGGTGCCCCCGCAGGGCGGGCGTAAACACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGCTGCAGTCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTGAAGTTCGGCATGATCCCGGAGTTCATCGGCCGCCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCCCGCAACGCCCTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTCGAAGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCATGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCGAGGGTCGTCATCACG
GCGGACGTCGTCCACTCCAACGTGAACCCGACCCTGATCCCGCGCGACGCGCGCGGGCGGGGGCCGGGGGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.687	93.925	0.589
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521