Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LG333_RS06795 Genome accession   NZ_CP085270
Coordinates   1298046..1298234 (+) Length   62 a.a.
NCBI ID   WP_047971098.1    Uniprot ID   A0A0J5GU63
Organism   Sutcliffiella horikoshii strain ABH-536     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1293046..1303234
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LG333_RS06770 (LG333_06725) - 1294754..1294936 (-) 183 WP_010192034.1 YjzD family protein -
  LG333_RS06775 (LG333_06730) - 1295051..1295188 (+) 138 WP_223492772.1 hypothetical protein -
  LG333_RS06780 (LG333_06735) - 1295333..1296073 (+) 741 WP_404470031.1 hypothetical protein -
  LG333_RS06785 (LG333_06740) - 1296165..1296935 (+) 771 WP_404470032.1 hypothetical protein -
  LG333_RS06790 (LG333_06745) med 1297077..1298030 (+) 954 WP_404470033.1 BMP family ABC transporter substrate-binding protein Regulator
  LG333_RS06795 (LG333_06750) comZ 1298046..1298234 (+) 189 WP_047971098.1 ComZ family protein Regulator
  LG333_RS06800 (LG333_06755) - 1298295..1298537 (-) 243 WP_404470034.1 hypothetical protein -
  LG333_RS06805 (LG333_06760) - 1298888..1299820 (+) 933 WP_404350679.1 beta-ketoacyl-ACP synthase III -
  LG333_RS06810 (LG333_06765) fabF 1299869..1301107 (+) 1239 WP_223493599.1 beta-ketoacyl-ACP synthase II -
  LG333_RS06815 (LG333_06770) - 1301230..1302012 (+) 783 WP_223492780.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7202.34 Da        Isoelectric Point: 4.0700

>NTDB_id=616752 LG333_RS06795 WP_047971098.1 1298046..1298234(+) (comZ) [Sutcliffiella horikoshii strain ABH-536]
MEQDRTMQYMAIAMKYLPEAKQMLDETGLELEPQHIQPLVSLLTKVMDEAYELGKQNALDME

Nucleotide


Download         Length: 189 bp        

>NTDB_id=616752 LG333_RS06795 WP_047971098.1 1298046..1298234(+) (comZ) [Sutcliffiella horikoshii strain ABH-536]
ATGGAACAAGATAGAACGATGCAATATATGGCGATAGCTATGAAATATTTACCAGAAGCAAAACAAATGCTTGATGAAAC
AGGGCTGGAGTTGGAGCCTCAACATATTCAGCCACTTGTCTCGTTACTGACAAAAGTGATGGATGAAGCCTATGAGCTTG
GAAAGCAAAATGCGTTAGATATGGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0J5GU63

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

51.724

93.548

0.484