Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   JIW86_RS22790 Genome accession   NZ_CP102509
Coordinates   4878369..4879493 (-) Length   374 a.a.
NCBI ID   WP_215147836.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00162     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4873369..4884493
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JIW86_RS22755 (JIW86_22755) cseB 4873447..4874160 (-) 714 WP_257555683.1 two-component system response regulator CseB -
  JIW86_RS22760 (JIW86_22760) - 4874220..4874861 (-) 642 WP_257559395.1 hypothetical protein -
  JIW86_RS22765 (JIW86_22765) - 4874900..4875460 (-) 561 WP_215147851.1 SigE family RNA polymerase sigma factor -
  JIW86_RS41455 - 4875656..4876558 (-) 903 WP_263862069.1 A/G-specific adenine glycosylase -
  JIW86_RS22780 (JIW86_22780) - 4876601..4877209 (-) 609 WP_257555684.1 phosphatase PAP2 family protein -
  JIW86_RS22785 (JIW86_22785) - 4877369..4878163 (+) 795 WP_257555685.1 hypothetical protein -
  JIW86_RS22790 (JIW86_22790) disA 4878369..4879493 (-) 1125 WP_215147836.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  JIW86_RS22795 (JIW86_22795) radA/sms 4879632..4881032 (-) 1401 WP_257555686.1 DNA repair protein RadA Machinery gene
  JIW86_RS22800 (JIW86_22800) - 4881191..4882918 (+) 1728 WP_257555687.1 BACON domain-containing protein -
  JIW86_RS22805 (JIW86_22805) - 4882915..4883832 (-) 918 WP_257555688.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40334.34 Da        Isoelectric Point: 5.0260

>NTDB_id=616748 JIW86_RS22790 WP_215147836.1 4878369..4879493(-) (disA) [Streptomyces sp. NBC_00162]
MAAKDGAAASGKSGASSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVEEALPALDALTHPELLELAIVAKALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=616748 JIW86_RS22790 WP_215147836.1 4878369..4879493(-) (disA) [Streptomyces sp. NBC_00162]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGCAAGTCGGGCGCGAGCTCCAAGCAGGAGGCCATGATGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCGCTGCGTGACGGCCTGGAACGGATCGTCCGCGGCAACACCGGCGGGCTCATCGTCC
TCGGCATGGACAAGAGCGTCGAAGCGATGTGCACCGGCGGGTTCGTCCTGGACGTGGAGTTCACGGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCATCCTGGACAAGGACATCACCAAGATCCTGCGGGCCGGCGTGCAGCTGGTGCC
GGACGCGTCGATCCCGACGGAGGAGACCGGAACGCGGCACCGTACGGCGGACCGCGTGTCCAAGCAGTGCGGCTTCCCGG
TGGTGTCGGTCTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTGCGCCTCGACGAGGTCGCGGGCACGCTGTC
GGCACTGGAGATCGAGGACCTGGTCACGGTCCGCGACGTGACCGCGGTCGCGCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACCGAGATCGCCGAGTACGTCGTCGAACTGGGTACGGACGGGCGGCTGCTGTCGCTCCAGCTGGACGAGCTGACGGTC
GGCATCGAGCAGGAGCGGGAGCTGGTGATCCGGGACTACGTTCCGGAGCCGACGGCGAAGCGTTCCCGCACGGTGGAGGA
GGCGCTGCCGGCGCTGGACGCGCTGACGCATCCGGAGCTGCTGGAACTGGCGATCGTGGCGAAGGCGCTGGGCTACACCG
GGTCCCCGGAGACCCTGGACTCGGCGGTGTCGCCCCGCGGGTACCGGCTGCTGGCGAAGGTTCCCCGGCTGCCGGGGGCC
ATCATCGAGCGGCTCGTGGAGCACTTCGGGGGCCTGCAGAAGCTGCTGGCGGCGTCGGTGGACGACCTCCAGACGGTCGA
CGGCGTCGGCGAGGCGCGCGCCCGCAGCGTCCGCGAGGGCCTGTCCCGCCTGGCGGAGTCCTCGATCCTCGAGCGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444