Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SANR_RS03535 Genome accession   NC_022239
Coordinates   712986..713789 (+) Length   267 a.a.
NCBI ID   WP_003034882.1    Uniprot ID   I0SHV3
Organism   Streptococcus anginosus C238     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 707986..718789
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SANR_RS03515 (SANR_0688) - 708965..710278 (+) 1314 WP_003035045.1 glycosyltransferase family 4 protein -
  SANR_RS03520 (SANR_0689) - 710305..710637 (+) 333 WP_003035050.1 hypothetical protein -
  SANR_RS03525 (SANR_0690) micA 710938..711639 (+) 702 WP_020999538.1 response regulator YycF Regulator
  SANR_RS03530 (SANR_0691) micB 711632..712984 (+) 1353 WP_020999539.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SANR_RS03535 (SANR_0692) vicX 712986..713789 (+) 804 WP_003034882.1 MBL fold metallo-hydrolase Regulator
  SANR_RS03540 - 713798..714157 (+) 360 Protein_671 YbaN family protein -
  SANR_RS03545 (SANR_0693) rnc 714540..715238 (+) 699 WP_003035086.1 ribonuclease III -
  SANR_RS03550 (SANR_0694) smc 715229..718762 (+) 3534 WP_020999540.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29824.80 Da        Isoelectric Point: 6.1778

>NTDB_id=61672 SANR_RS03535 WP_003034882.1 712986..713789(+) (vicX) [Streptococcus anginosus C238]
MSEKGFKYSILASGSTGNCFYLETPKKRLLIDAGLSGKKITSLLSEIGRKPEDLDAILVTHEHKDHIHGVGVLARKYHLD
IYANQETWNAMEVALGKIDVSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRLMKDDKSFVLLTDTGYVSDRMAGII
ENADGYLIESNHDIEILRSGAYPWSLKQRILSDQGHLSNDDGAETMIRTLGYRTKKIYLGHLSKENNTKELAHITMVNQL
AQADLAVEHDFHICDTSPDTATPLTNI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=61672 SANR_RS03535 WP_003034882.1 712986..713789(+) (vicX) [Streptococcus anginosus C238]
ATGAGCGAGAAAGGATTTAAGTATAGTATTTTAGCATCGGGTTCTACCGGTAACTGTTTTTATTTAGAAACTCCAAAGAA
GAGGTTGTTGATTGATGCGGGCTTGTCTGGGAAGAAAATTACCAGCTTATTGAGTGAGATTGGCCGCAAGCCAGAGGATT
TGGATGCTATTTTGGTGACGCACGAGCATAAGGATCATATCCACGGTGTGGGCGTTTTGGCACGGAAATATCATTTAGAC
ATTTATGCCAATCAAGAAACATGGAATGCTATGGAAGTAGCGCTTGGGAAGATTGATGTCAGTCAGAAGCATATTTTTGA
AATGGGAAAAACCAAGACATTTGGCGATATTGACATTGAAAGTTTTGGGGTCAGTCATGATGCGGTTGCGCCGCAATTTT
ACCGATTGATGAAGGATGATAAGAGTTTTGTTCTACTGACGGATACTGGCTATGTTAGCGATCGTATGGCAGGGATTATT
GAAAATGCGGACGGGTATTTGATTGAGTCTAACCATGATATTGAAATCCTTCGTAGCGGAGCTTATCCTTGGAGTCTGAA
GCAACGGATTTTATCTGACCAAGGACATTTGTCGAATGATGACGGGGCAGAAACCATGATTCGTACGTTGGGTTATCGCA
CTAAGAAAATCTATCTAGGTCATCTTAGCAAAGAAAACAATACCAAAGAATTGGCTCATATCACAATGGTCAATCAATTG
GCACAGGCTGATTTGGCGGTTGAGCATGATTTTCATATTTGTGATACATCGCCAGATACGGCGACACCTTTAACAAATAT
TTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0SHV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

81.648

100

0.816

Multiple sequence alignment