Detailed information NTG0061672

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: QMN35_RS00875
• Genome accession: NZ_AP019538
• Coordinates: 197829..198812 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196487.1
• Uniprot ID: -
• Organism: Escherichia coli strain THO-008
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 192829..203812

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMN35_RS00860 (ECTHO008_001680)	dppA	193973..195580 (+)	1608	WP_001222875.1	dipeptide ABC transporter substrate-binding protein DppA	-
QMN35_RS00865 (ECTHO008_001690)	dppB	195887..196906 (+)	1020	WP_000938853.1	dipeptide ABC transporter permease DppB	-
QMN35_RS00870 (ECTHO008_001700)	dppC	196916..197818 (+)	903	WP_000084667.1	dipeptide ABC transporter permease DppC	-
QMN35_RS00875 (ECTHO008_001710)	amiE	197829..198812 (+)	984	WP_001196487.1	dipeptide ABC transporter ATP-binding protein	Regulator
QMN35_RS00880 (ECTHO008_001720)	dppF	198809..199813 (+)	1005	WP_000107026.1	dipeptide ABC transporter ATP-binding subunit DppF	-
QMN35_RS00885 (ECTHO008_001730)	yhjV	199843..201114 (-)	1272	WP_001328774.1	aromatic amino acid transport family protein	-
QMN35_RS00890 (ECTHO008_001740)	-	201590..201697 (+)	108	WP_000170743.1	type I toxin-antitoxin system toxin Ldr family protein	-
QMN35_RS00895 (ECTHO008_001750)	-	202073..202180 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
QMN35_RS00900 (ECTHO008_001760)	-	202556..202663 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
QMN35_RS00905 (ECTHO008_001770)	-	203039..203146 (+)	108	WP_000170736.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35860.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=61672 QMN35_RS00875 WP_001196487.1 197829..198812(+) (amiE) [Escherichia coli strain THO-008]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=61672 QMN35_RS00875 WP_001196487.1 197829..198812(+) (amiE) [Escherichia coli strain THO-008]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAGCTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCACTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCACTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407