Detailed information NTG0616659

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: LG308_RS14230
• Genome accession: NZ_CP085257
• Coordinates: 3095785..3098010 (-)
• Length: 741 a.a.
• NCBI ID: WP_404436943.1
• Uniprot ID: -
• Organism: Stutzerimonas chloritidismutans strain ABH-495
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3090785..3103010

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LG308_RS14195 (LG308_14175)	murB	3091179..3092198 (-)	1020	WP_404436935.1	UDP-N-acetylmuramate dehydrogenase	-
LG308_RS14200 (LG308_14180)	-	3092195..3092659 (-)	465	WP_404436937.1	low molecular weight protein-tyrosine-phosphatase	-
LG308_RS14205 (LG308_14185)	kdsB	3092662..3093426 (-)	765	WP_404436939.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
LG308_RS14210 (LG308_14190)	-	3093423..3093608 (-)	186	WP_222908926.1	Trm112 family protein	-
LG308_RS14215 (LG308_14195)	lpxK	3093661..3094656 (-)	996	WP_404436941.1	tetraacyldisaccharide 4'-kinase	-
LG308_RS14220 (LG308_14200)	-	3094656..3095084 (-)	429	WP_222908928.1	biopolymer transporter ExbD	-
LG308_RS14225 (LG308_14205)	-	3095081..3095713 (-)	633	WP_404441653.1	MotA/TolQ/ExbB proton channel family protein	-
LG308_RS14230 (LG308_14210)	comA	3095785..3098010 (-)	2226	WP_404436943.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LG308_RS14235 (LG308_14215)	-	3098188..3098703 (+)	516	WP_222908930.1	DUF2062 domain-containing protein	-
LG308_RS14240 (LG308_14220)	-	3098712..3099959 (-)	1248	WP_404436945.1	lipoprotein-releasing ABC transporter permease subunit	-
LG308_RS14245 (LG308_14225)	lolD	3099959..3100657 (-)	699	WP_404441655.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
LG308_RS14250 (LG308_14230)	-	3100665..3101912 (-)	1248	WP_404436947.1	lipoprotein-releasing ABC transporter permease subunit	-
LG308_RS14255 (LG308_14235)	-	3102013..3102585 (+)	573	WP_404436949.1	PilZ domain-containing protein	-
LG308_RS14260 (LG308_14240)	-	3102589..3102894 (+)	306	WP_222908934.1	phosphodiesterase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80393.91 Da
• Isoelectric Point: 8.4113

>NTDB_id=616659 LG308_RS14230 WP_404436943.1 3095785..3098010(-) (comA) [Stutzerimonas chloritidismutans strain ABH-495]
MRTAMLALAAGLLLLRFLPQLPPVSMILVMLVAGLALLPFRWRAIGCFLCGLGWACLHAHWAVDDRLPTELDGRTFWLEG
QVTGLPDVRGGVVRFEIVDVSSRHKGLPSRLRLAWYGGPEIRSGERWRLAAKLKKPRGLVNPHAFDYEAWLLARRIGASG
TIKAGSRLSTPDGGEAWRDQLRHRLLSVDAHGRSGAIAALVVGDDSGLSATDWRVLQDTGTVHLMVISGQHVGMLAGLLY
GMVALMARWGPWPRRVPWLPCACGLALSGALAYGWLAGFDVPVQRALVMVALVLLWRLRYRHLGVWLPLLIALDGVLLID
PLVGLQSGFWLSFSAVALLALIFRGRLGASSWWEVLGRAQWSMALGLLPVLLALGLPVSLSGPIANLFAVPLVSVLIVPL
SLAGTSLLWLPMAGESLLWLAGGMLSVLFDALHWLAGWQSAWLPVSLPLGGWLLVFVGMLVTLLPAGVPFRALGVVLLAP
LLFPPADKPSTGEADLWVFDVGQGLAVLVRTGTHALLYDAGPRYGDFDIGERVVFPSLRTLGVAELDLLVLSHADSDHAG
GAQAIQRLMPVGQVLSGEPGRLTAALNAKTCRSGEQWEWDSVSFRLWRWSEAGEGNQSSCVLMVEANGERLLLTGDIDVP
AEQALLTENMPLDARWLLVPHHGSRSSSSTEFIDAVSAEGALVSRSLHNAFGHPHPDVVRRLNASGARVYDTAEQGALHI
RLGRFEPVRGSRAQQRFWQEK

Nucleotide

• Length: 2226 bp

>NTDB_id=616659 LG308_RS14230 WP_404436943.1 3095785..3098010(-) (comA) [Stutzerimonas chloritidismutans strain ABH-495]
ATGCGTACAGCGATGCTGGCGCTGGCGGCAGGCCTCTTACTGCTGCGCTTCTTGCCGCAACTTCCGCCTGTGTCGATGAT
CCTCGTGATGCTTGTCGCGGGCTTGGCCTTGTTGCCGTTCCGCTGGCGAGCGATCGGTTGTTTTCTTTGCGGCCTTGGCT
GGGCTTGTTTACACGCTCACTGGGCGGTGGATGATCGTCTCCCTACGGAACTTGACGGGCGTACATTCTGGCTCGAGGGC
CAAGTAACTGGTTTGCCTGACGTTCGTGGCGGTGTGGTGCGCTTCGAGATTGTCGACGTATCGTCCCGACATAAGGGCTT
GCCGTCACGCCTTCGCCTGGCGTGGTACGGAGGGCCGGAAATTCGGTCGGGAGAGCGATGGCGGCTCGCCGCCAAGCTGA
AAAAACCCCGCGGTCTGGTCAATCCACACGCGTTCGATTATGAGGCCTGGCTCCTGGCTCGGCGCATTGGCGCGAGCGGC
ACGATCAAGGCTGGCTCGAGGCTATCGACTCCAGACGGGGGCGAGGCGTGGCGCGATCAGCTGCGCCACCGTTTGTTGTC
CGTTGACGCACATGGCCGCTCAGGCGCAATCGCCGCGTTAGTAGTAGGAGATGACAGCGGCCTGTCCGCGACCGATTGGC
GGGTCCTTCAGGACACCGGCACGGTACATCTCATGGTGATTTCCGGCCAGCATGTCGGCATGCTGGCCGGCCTGCTCTAC
GGTATGGTCGCATTGATGGCTCGCTGGGGCCCTTGGCCCCGACGCGTTCCCTGGTTGCCCTGCGCTTGCGGCTTGGCGCT
GTCCGGCGCGCTTGCGTACGGCTGGCTGGCGGGCTTCGACGTACCGGTCCAGCGAGCGTTGGTCATGGTCGCGCTGGTGC
TTCTGTGGCGCTTGCGGTATCGACACCTCGGCGTCTGGCTACCCTTGCTGATTGCGCTTGATGGCGTGCTGTTGATCGAT
CCGCTGGTGGGTCTGCAGTCAGGGTTCTGGTTGTCATTCAGTGCAGTTGCGTTGCTGGCGCTGATCTTTCGAGGACGTCT
TGGCGCGAGCTCGTGGTGGGAGGTGCTAGGCCGTGCGCAGTGGAGCATGGCGCTCGGCCTGTTGCCGGTCTTGCTTGCGT
TGGGGTTGCCAGTGAGCCTCAGCGGGCCGATCGCCAACCTGTTTGCAGTGCCGTTGGTCAGCGTGCTGATCGTGCCGCTC
TCGCTGGCGGGGACCTCGCTATTATGGTTGCCGATGGCAGGCGAGTCGCTACTGTGGCTAGCAGGTGGGATGCTGTCGGT
GTTATTCGATGCGTTGCATTGGCTGGCTGGCTGGCAATCGGCTTGGCTTCCGGTCTCCTTGCCACTGGGGGGATGGTTGC
TGGTTTTCGTCGGGATGCTGGTCACGCTACTGCCAGCGGGTGTGCCGTTTCGGGCGTTGGGCGTGGTGCTTCTTGCCCCC
TTGCTGTTTCCGCCAGCCGACAAGCCTTCAACCGGCGAAGCGGATTTATGGGTGTTCGATGTCGGCCAGGGATTGGCAGT
GCTGGTGCGCACAGGTACCCATGCATTGCTCTACGACGCGGGGCCCCGTTATGGCGACTTCGATATCGGCGAGCGGGTTG
TATTTCCATCGTTGCGAACATTGGGTGTGGCCGAGCTCGATCTACTGGTTTTGAGCCATGCCGATAGCGACCACGCCGGT
GGCGCTCAGGCAATCCAGCGGCTTATGCCGGTCGGGCAGGTGCTGAGCGGCGAACCGGGAAGGCTAACCGCGGCGTTGAA
CGCCAAAACGTGCCGCTCTGGAGAGCAGTGGGAGTGGGACTCGGTTAGCTTCAGGCTTTGGCGATGGTCGGAGGCAGGAG
AGGGCAACCAGTCCTCATGTGTACTCATGGTCGAAGCCAATGGCGAACGTCTGTTGCTCACTGGGGATATCGATGTGCCG
GCTGAGCAGGCGCTGCTAACAGAAAATATGCCCCTTGATGCCCGCTGGTTATTGGTCCCTCACCATGGCAGTCGCAGCTC
GTCGTCAACCGAGTTCATCGACGCGGTGAGCGCGGAGGGCGCGCTCGTTTCGCGCAGCTTGCATAATGCGTTTGGGCATC
CGCATCCGGATGTCGTCCGACGCCTGAACGCTTCCGGCGCTCGCGTCTATGACACGGCCGAGCAGGGGGCGCTGCACATC
CGTCTCGGACGTTTCGAACCCGTTCGCGGATCGCGTGCTCAACAGCGGTTCTGGCAGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (19-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (501-682)

• Competence protein (Competence) (200-463)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	71.111	97.166	0.691
comA	Ralstonia pseudosolanacearum GMI1000	34.67	100	0.397