Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   SANR_RS03020 Genome accession   NC_022239
Coordinates   591374..593176 (+) Length   600 a.a.
NCBI ID   WP_003037368.1    Uniprot ID   I0SB93
Organism   Streptococcus anginosus C238     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 586374..598176
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SANR_RS03000 (SANR_0587) - 587838..588155 (+) 318 WP_003037503.1 PTS cellobiose transporter subunit IIA -
  SANR_RS03005 (SANR_0588) - 588179..588685 (+) 507 WP_041791070.1 hypothetical protein -
  SANR_RS03010 (SANR_0589) celB 588725..590068 (+) 1344 WP_003037415.1 PTS cellobiose transporter subunit IIC -
  SANR_RS03015 (SANR_0590) coiA 590391..591422 (+) 1032 WP_003037510.1 competence protein CoiA Machinery gene
  SANR_RS03020 (SANR_0591) pepF 591374..593176 (+) 1803 WP_003037368.1 oligoendopeptidase F Regulator
  SANR_RS03025 (SANR_0592) - 593178..593861 (+) 684 WP_003037234.1 O-methyltransferase -
  SANR_RS03030 (SANR_0593) prsA 593968..594906 (+) 939 WP_003037344.1 peptidylprolyl isomerase PrsA -
  SANR_RS03035 (SANR_0594) - 595044..595613 (+) 570 WP_080553209.1 LURP-one-related/scramblase family protein -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69162.20 Da        Isoelectric Point: 4.6077

>NTDB_id=61665 SANR_RS03020 WP_003037368.1 591374..593176(+) (pepF) [Streptococcus anginosus C238]
MAKQRNEIEEKYTWDLTTIFPTDEAFEAALTQVSKELKEASSLAGHLLDSADSLLKTTEIQLDLMRRIEKLYSYAHMKND
QDTRVAKYQEYQAKGMAIYSEFGQVFAFYEPEFMAITDEQYQTFLAEKPELQIYQHFFDKLLQKKPHILSQREEELLAGA
GEIFSAAGDTFGILDNADIVFPTVHDEEGNEVQLTHGNYISLVESKNRTVRKEAYEALYSVYEQYQHTYAKTLQTNVKVH
NYNAKVRNFSSAREAALSANFIPESVYDSLVSAVNKHLPLLHRYIALRAKILGLSDLKMYDLYTPLSEADYKFTYEEALT
KAEEVLAILGDDYLSRVKKAFSERWIDVHENQGKRSGAYSGGSYDTNAFMLLNWQDTLDNLFTLVHETGHSMHSSYTRET
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVDDDQTRFAILNHFLDGFRGTVFRQTQFAEFEHAIHKADQEGQVLTSEF
LNDLYADLNEKYYGLTKEDNPQIQYEWARIPHFYYDYYVFQYSTGFSAASALADKIVNGTQEDKEKYLNYLKAGNSDYPL
NVIKKAGVDMEKEDYLNAAFAVFERRLDEFEALVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=61665 SANR_RS03020 WP_003037368.1 591374..593176(+) (pepF) [Streptococcus anginosus C238]
ATGGCAAAACAAAGAAATGAAATTGAAGAAAAATACACTTGGGACCTAACAACGATTTTCCCAACAGATGAAGCTTTTGA
GGCAGCGTTAACTCAAGTTTCAAAAGAATTAAAAGAAGCCAGCAGCTTAGCCGGTCATCTTTTGGACTCAGCTGACAGCC
TCTTAAAAACAACAGAAATCCAATTGGACTTGATGCGTCGTATCGAAAAACTCTATTCCTATGCTCACATGAAAAATGAC
CAAGATACGCGCGTGGCAAAATATCAAGAATACCAAGCAAAAGGAATGGCCATTTATAGTGAGTTCGGACAGGTCTTTGC
TTTCTATGAACCAGAATTTATGGCAATCACAGACGAGCAATATCAGACTTTCTTAGCTGAAAAGCCCGAATTGCAAATCT
ATCAGCACTTCTTTGATAAGCTACTGCAAAAGAAACCTCACATCCTTTCTCAACGTGAAGAAGAATTGTTGGCAGGAGCT
GGTGAAATTTTTAGTGCTGCGGGTGATACTTTTGGAATCTTAGACAATGCTGATATTGTCTTTCCAACCGTGCACGACGA
AGAAGGAAATGAAGTGCAATTGACGCACGGAAATTACATTAGTTTAGTGGAGTCGAAAAATCGTACAGTCCGCAAGGAAG
CTTATGAAGCGCTTTATAGCGTCTATGAGCAATACCAACATACTTATGCTAAGACACTCCAAACGAATGTTAAAGTTCAT
AATTACAATGCCAAAGTTCGTAATTTTTCTTCTGCGCGTGAAGCTGCCTTGTCTGCTAACTTTATTCCAGAAAGTGTTTA
TGATAGCTTAGTGTCTGCGGTAAACAAACATTTGCCACTCTTACATCGCTATATTGCGCTACGTGCAAAGATTTTAGGCC
TTTCTGATTTGAAAATGTACGACCTCTATACACCATTGTCAGAAGCAGATTACAAATTTACCTATGAAGAAGCTTTGACA
AAAGCAGAAGAAGTTTTAGCGATTCTCGGAGATGATTATCTTAGTCGAGTGAAAAAGGCCTTTTCAGAGCGCTGGATTGA
TGTTCATGAGAATCAAGGCAAACGCTCAGGAGCTTATTCTGGCGGTTCTTACGATACCAATGCTTTTATGTTGCTCAACT
GGCAAGATACGTTGGACAATCTTTTCACACTGGTTCATGAAACGGGGCACAGCATGCATTCCAGCTATACTCGTGAAACA
CAGCCGTACGTTTACGGAGATTATTCTATTTTCTTAGCTGAGATTGCTTCTACGACCAATGAAAATATCCTAACGGAGAA
ATTATTGGAAGAAGTAGATGACGATCAAACCCGCTTTGCGATTCTGAATCATTTCTTAGATGGCTTCCGTGGGACTGTTT
TCCGCCAAACTCAATTTGCCGAGTTTGAACATGCCATTCACAAAGCTGACCAAGAAGGTCAAGTCTTGACGAGTGAATTT
TTGAATGATTTGTACGCAGATTTGAATGAAAAATATTATGGTTTGACGAAAGAAGACAATCCACAAATTCAATACGAATG
GGCACGGATTCCGCATTTCTACTATGATTATTATGTATTCCAATATTCTACTGGTTTCTCAGCTGCTTCTGCCTTAGCAG
ATAAGATTGTCAACGGAACGCAAGAAGATAAAGAGAAGTATCTCAACTACTTGAAAGCAGGAAATTCTGATTATCCGCTG
AATGTCATTAAAAAAGCTGGTGTAGATATGGAAAAAGAAGACTACCTCAATGCTGCCTTTGCAGTTTTTGAACGTCGTCT
TGATGAATTTGAAGCACTCGTAGAAAAGTTAGGACTGGCATAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(112-181)

Peptidase family M3 (Peptidase_M3)

(202-581)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0SB93

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

69.128

99.333

0.687

Multiple sequence alignment