Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   SANR_RS01290 Genome accession   NC_022239
Coordinates   239686..240957 (+) Length   423 a.a.
NCBI ID   WP_020999453.1    Uniprot ID   -
Organism   Streptococcus anginosus C238     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 234686..245957
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SANR_RS01270 (SANR_0245) - 236411..236899 (+) 489 WP_003035372.1 prolyl-tRNA synthetase associated domain-containing protein -
  SANR_RS01275 (SANR_0246) yajC 237002..237340 (+) 339 WP_003026971.1 preprotein translocase subunit YajC -
  SANR_RS01280 (SANR_0247) - 237684..238433 (+) 750 WP_003035391.1 isoprenyl transferase -
  SANR_RS01285 (SANR_0248) - 238442..239245 (+) 804 WP_003035312.1 phosphatidate cytidylyltransferase -
  SANR_RS01290 (SANR_0249) eeP 239686..240957 (+) 1272 WP_020999453.1 M50 family metallopeptidase Regulator
  SANR_RS01295 (SANR_0250) - 240995..242854 (+) 1860 WP_003035371.1 proline--tRNA ligase -
  SANR_RS01300 (SANR_0251) - 243118..243756 (+) 639 WP_003035388.1 hypothetical protein -
  SANR_RS01305 (SANR_0252) - 243823..245124 (+) 1302 WP_003035306.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  SANR_RS01310 (SANR_0253) - 245306..245866 (+) 561 WP_003035299.1 folate family ECF transporter S component -

Sequence


Protein


Download         Length: 423 a.a.        Molecular weight: 45870.56 Da        Isoelectric Point: 9.5098

>NTDB_id=61647 SANR_RS01290 WP_020999453.1 239686..240957(+) (eeP) [Streptococcus anginosus C238]
MQSGIIGIITFIIVFGIIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFAHIGKDGTAYTIRMLPLGGYVRMAGWGEDST
EIKTGTPASLTLNEAGKVVRINLSGKKIDQTALPMNVTGFDLENKLEITGLVLDEQKTYAVDHDATIVEEDGTEVRIAPL
DVQYQNASLGGRLITNFAGPMNNFILGIVAFLLLIFMQGGVANPNTNHIRVLQDGALAQAGVKNNDQILKVGQAEIKNWS
DLTQAVQSETKNSKGQSELNVTVKSGNKVRELTVKPKKERGRYLLGVMPGLKSDFPSMIAGGFSMAWNASFRIFDALKNL
IFHPDINKLGGPVAIYKASSDAAKGGLESVIALLAMLSLNIGIFNLIPIPALDGGKIVLNLLEAIRRKPLKQETETYVTL
AGVAIMVVLLIAVTWNDIMRTFF

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=61647 SANR_RS01290 WP_020999453.1 239686..240957(+) (eeP) [Streptococcus anginosus C238]
ATGCAGTCTGGTATTATAGGAATTATCACCTTTATCATTGTTTTTGGAATTATTGTAGTTGTTCATGAGTTTGGACATTT
CTATTTTGCGAAAAAATCGGGCATTTTGGTGCGGGAGTTTGCTATTGGAATGGGCCCGAAAATTTTTGCTCATATCGGAA
AAGACGGCACGGCCTATACTATTCGGATGTTACCGCTGGGTGGCTATGTTCGTATGGCTGGTTGGGGCGAAGATTCGACC
GAGATTAAAACCGGAACACCTGCTAGTTTGACTTTAAATGAAGCAGGCAAGGTCGTCCGAATCAACCTTTCGGGCAAGAA
AATTGATCAAACTGCTCTGCCGATGAATGTGACGGGCTTTGATTTAGAAAACAAGCTTGAAATCACTGGTTTGGTACTAG
ATGAACAAAAGACCTATGCGGTTGACCATGATGCAACAATCGTAGAAGAAGACGGCACAGAGGTTCGGATTGCTCCGCTT
GATGTGCAGTATCAAAATGCTAGTTTAGGCGGGCGCCTCATTACCAACTTTGCAGGACCGATGAACAATTTCATTTTGGG
GATTGTAGCTTTTCTGTTGTTGATTTTCATGCAGGGTGGCGTTGCCAATCCCAATACAAATCACATTCGTGTCTTACAGG
ACGGTGCCTTGGCACAAGCTGGTGTAAAAAATAACGACCAGATTTTAAAAGTTGGTCAAGCCGAAATTAAGAATTGGTCG
GATTTGACCCAAGCTGTTCAGTCTGAGACGAAAAACAGTAAAGGGCAATCAGAACTAAATGTGACGGTTAAAAGCGGAAA
TAAAGTTCGAGAGCTGACAGTTAAGCCTAAAAAAGAGCGAGGAAGATATCTATTAGGAGTGATGCCGGGCTTGAAATCAG
ATTTTCCGTCTATGATCGCGGGTGGGTTTAGCATGGCTTGGAACGCTAGTTTCCGCATCTTTGACGCTTTAAAAAATTTA
ATTTTCCACCCAGACATCAATAAACTAGGCGGTCCTGTGGCGATTTACAAAGCCAGTAGTGACGCTGCTAAAGGCGGTCT
TGAAAGTGTTATCGCTTTATTAGCTATGCTATCTCTAAATATTGGTATTTTTAATCTCATTCCTATCCCAGCGCTTGACG
GTGGAAAGATTGTGCTCAATCTTCTTGAAGCCATTCGTCGCAAGCCATTGAAACAGGAAACAGAAACCTATGTCACTTTA
GCAGGTGTCGCCATTATGGTGGTGTTGCTGATTGCGGTGACCTGGAATGATATTATGAGAACCTTCTTTTAA

Domains


Predicted by InterproScan.

(10-409)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65.789

98.818

0.65

  eeP Streptococcus thermophilus LMD-9

65.55

98.818

0.648


Multiple sequence alignment