Detailed information NTG0616155

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: NRF20_RS30220
• Genome accession: NZ_CP102361
• Coordinates: 6589056..6590354 (+)
• Length: 432 a.a.
• NCBI ID: WP_266361525.1
• Uniprot ID: -
• Organism: Streptomyces sp. R-74717
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6584056..6595354

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NRF20_RS30190 (NRF20_30155)	-	6585075..6585269 (+)	195	WP_266361523.1	hypothetical protein	-
NRF20_RS30205 (NRF20_30170)	tig	6585870..6587267 (+)	1398	WP_398628726.1	trigger factor	-
NRF20_RS30210 (NRF20_30175)	-	6587532..6588137 (+)	606	WP_266365601.1	ATP-dependent Clp protease proteolytic subunit	-
NRF20_RS30215 (NRF20_30180)	clpP	6588218..6588898 (+)	681	WP_093898221.1	ATP-dependent Clp protease proteolytic subunit	Regulator
NRF20_RS30220 (NRF20_30185)	clpX	6589056..6590354 (+)	1299	WP_266361525.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
NRF20_RS30225 (NRF20_30190)	-	6590425..6591477 (-)	1053	WP_413754622.1	hypothetical protein	-
NRF20_RS30230 (NRF20_30195)	-	6591631..6594252 (+)	2622	WP_413753660.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47301.10 Da
• Isoelectric Point: 4.8335

>NTDB_id=616155 NRF20_RS30220 WP_266361525.1 6589056..6590354(+) (clpX) [Streptomyces sp. R-74717]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIELCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDDGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=616155 NRF20_RS30220 WP_266361525.1 6589056..6590354(+) (clpX) [Streptomyces sp. R-74717]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGAACTCTGCAACGAGATCATCGAGGAGGAACTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTTCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGGCGGCGCGCAGGGCCG
GGACGACGCCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTTCTCGCGCAGA
CCCTGGCCCGTATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCTGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGTGAGGGCGTCCAGCAGGCCC
TGTTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCTCCGGTCTGGAGAGGATCATCGAGTCGCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGGGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGGCTGCCCGTCCTCACCTCGGTCCACAACCTGGACCGT
GAGGCACTGCTGCAGATCCTCGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTATCAACGACTGTTCGAACTCGACGGTGT
CGAGCTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGTGGTCTGC
GGGCCATCATGGAGGAGGTCCTCCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
GCGGACGTCGTCCGCAACAACGTGAACCCGACCCTGGTCCCGCGCGAGCCGCGGACGATCGGCAAGGGTGATGACGGGCG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.056	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.641	95.37	0.512