Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   NRF20_RS25395 Genome accession   NZ_CP102361
Coordinates   5547613..5548737 (-) Length   374 a.a.
NCBI ID   WP_114245192.1    Uniprot ID   A0ABY9IUC4
Organism   Streptomyces sp. R-74717     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5542613..5553737
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NRF20_RS25370 (NRF20_25330) - 5543255..5543995 (-) 741 WP_398628062.1 hypothetical protein -
  NRF20_RS25375 (NRF20_25335) - 5543983..5544633 (-) 651 WP_266360524.1 SigE family RNA polymerase sigma factor -
  NRF20_RS25380 (NRF20_25340) - 5544809..5545711 (-) 903 WP_398628061.1 A/G-specific adenine glycosylase -
  NRF20_RS25385 (NRF20_25345) - 5545856..5546500 (-) 645 WP_398628060.1 phosphatase PAP2 family protein -
  NRF20_RS25390 (NRF20_25350) - 5546674..5547504 (+) 831 WP_398628059.1 hypothetical protein -
  NRF20_RS25395 (NRF20_25355) disA 5547613..5548737 (-) 1125 WP_114245192.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  NRF20_RS25400 (NRF20_25360) radA/sms 5548818..5550230 (-) 1413 WP_398628058.1 DNA repair protein RadA Machinery gene
  NRF20_RS25405 (NRF20_25365) - 5550471..5552360 (+) 1890 WP_413753315.1 BACON domain-containing protein -
  NRF20_RS25410 (NRF20_25370) - 5552466..5553317 (-) 852 WP_398628056.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40372.27 Da        Isoelectric Point: 4.9352

>NTDB_id=616146 NRF20_RS25395 WP_114245192.1 5547613..5548737(-) (disA) [Streptomyces sp. R-74717]
MAASDRAASPGKSGQGTGNEALMRASLTAVAPGMALRDGLERILRGNTGGLIVLGMDRTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=616146 NRF20_RS25395 WP_114245192.1 5547613..5548737(-) (disA) [Streptomyces sp. R-74717]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGTT
GACCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATCCTCCGTGGCAACACCGGCGGGCTGATCGTCC
TGGGCATGGACAGAACCGTCGAGTCGATGTGCACCGGCGGATTCGTGCTGGACGTGGAGTTCACCGCGACGCGTCTGCGC
GAGCTGGCCAAGCTCGACGGGGCGCTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGTGTGCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCACCTCATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAATCAGGCACTCGCCACCCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTCGCGGGCACCCTCTC
GGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGATGTGACGGCCGTCGCACAGCGGCTGGAGATGGTCCGCCGGATCG
CGACCGAGATCGCGGAGTACGTGGTGGAGCTGGGCACCGACGGCCGGCTCCTCTCGCTCCAGCTGGACGAGTTGATCGCC
GGCGTCGAGCCGGAGCGTGAGCTGGTCGTGCGCGACTATGTGCCGGAGCCGACCGCGAAGCGGTCCCGTACGGTCGCCGA
AGCACTGACCGAACTCGACGCGCTCTCCCACACCGAACTGCTCGAACTCCCCGTCGTGGCAAGGGCGCTGGGGTACAGCG
GCTCGCCGGAGACGCTGGATTCGGCGGTCTCGCCGCGCGGCTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGGGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTCCTTGCCGCCAGCGTGGACGACCTCCAGACGGTGGA
CGGGGTCGGCGAGGCGCGGGCGAGGAGCGTGCGCGAGGGGTTGTCGCGACTGGCCGAGTCGTCGATTCTCGAGCGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436