Detailed information NTG0616120

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: LG309_RS07480
• Genome accession: NZ_CP085231
• Coordinates: 1603348..1605573 (+)
• Length: 741 a.a.
• NCBI ID: WP_404397638.1
• Uniprot ID: -
• Organism: Stutzerimonas chloritidismutans strain ADH2-893
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1598348..1610573

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LG309_RS07450 (LG309_07450)	-	1598495..1598803 (-)	309	WP_014820912.1	hypothetical protein	-
LG309_RS07455 (LG309_07455)	-	1598807..1599442 (-)	636	WP_104097241.1	PilZ domain-containing protein	-
LG309_RS07460 (LG309_07460)	-	1599478..1600725 (+)	1248	WP_014820910.1	lipoprotein-releasing ABC transporter permease subunit	-
LG309_RS07465 (LG309_07465)	lolD	1600733..1601431 (+)	699	WP_041014488.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
LG309_RS07470 (LG309_07470)	-	1601431..1602675 (+)	1245	WP_003299645.1	lipoprotein-releasing ABC transporter permease subunit	-
LG309_RS07475 (LG309_07475)	-	1602682..1603197 (-)	516	WP_404397636.1	DUF2062 domain-containing protein	-
LG309_RS07480 (LG309_07480)	comA	1603348..1605573 (+)	2226	WP_404397638.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
LG309_RS07485 (LG309_07485)	-	1605645..1606277 (+)	633	WP_404397641.1	MotA/TolQ/ExbB proton channel family protein	-
LG309_RS07490 (LG309_07490)	-	1606274..1606702 (+)	429	WP_014820907.1	biopolymer transporter ExbD	-
LG309_RS07495 (LG309_07495)	lpxK	1606702..1607706 (+)	1005	WP_404397645.1	tetraacyldisaccharide 4'-kinase	-
LG309_RS07500 (LG309_07500)	-	1607752..1607937 (+)	186	WP_003299639.1	Trm112 family protein	-
LG309_RS07505 (LG309_07505)	kdsB	1607934..1608698 (+)	765	WP_371104387.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
LG309_RS07510 (LG309_07510)	-	1608700..1609164 (+)	465	WP_125861559.1	low molecular weight protein-tyrosine-phosphatase	-
LG309_RS07515 (LG309_07515)	murB	1609161..1610180 (+)	1020	WP_125861560.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80982.53 Da
• Isoelectric Point: 10.3073

>NTDB_id=616120 LG309_RS07480 WP_404397638.1 1603348..1605573(+) (comA) [Stutzerimonas chloritidismutans strain ADH2-893]
MRTWMLALAAGLVLPRFLPALPSVWILCVLGVLGGLLLSRRRWASSGLLLLGFAWACWQCQSAIDDRLPVSQDGRTYWIQ
GTVSGLPTSTGNVVRFELEDIESRHAGLPSKVRLSWYGGPQVRAGERWRLAARLKRPRGLVNPQAFDYEAWLLARRIGAT
GSVKAGERLFAPHSVNSWRDRLRLRLMEVSASGRQGAIAALVVGDDSGLSRQDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALAARWGFWPSRWPWLPCSCALALAGALSYGWLAGFDVPVRRACLMVAVVLLWRLRFRHLGVWQPLLLALNGVLLV
DPLVTLQPGFWLSFGAVAVLALAFSGRLGRWKWWATLTRAQWAASLGLLPLLLTLGLPVSASGPLANLIAVPWVSLTVPF
ALLGTLLLPLGAIGETLLWLVGTSLALLFELLSAMATWQPAWLAVGIPIWALLMIGLGVLLMLLPSGVPVRALGLVLLAP
LVYPPYSEVAEGRAQVSVLDVGQGLSVLVRTREHALLYDAGPRQGDFDTGERVVFPSLRSLGVKRLDILLLSHADNDHSG
GAQAIRRLLQVARTVSGEPQRHATDLNAKPCKNGAEWRWNGVRFSLWQWLAARESNQTSCVLLVEANGERVLLTGDIDQA
AEQALLLSGQDVKAQWLLLPHHGSRSSSSEPFLRAVEPSAALISRSLHNAFGHPHPTVTARLEASAIDVYDTALHGAIRI
DLGDFSVAEIQRAERRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=616120 LG309_RS07480 WP_404397638.1 1603348..1605573(+) (comA) [Stutzerimonas chloritidismutans strain ADH2-893]
ATGCGCACATGGATGTTGGCGCTCGCGGCAGGTCTCGTCTTGCCCCGTTTCTTACCGGCGTTGCCCTCTGTCTGGATCTT
GTGCGTGCTTGGCGTGCTGGGGGGCTTGTTGCTTTCGCGTCGGCGCTGGGCGTCGTCCGGGTTGCTTCTCCTCGGGTTCG
CCTGGGCATGCTGGCAGTGCCAGAGTGCCATTGATGATCGCCTGCCCGTTTCGCAAGATGGCCGGACATACTGGATCCAG
GGGACGGTCAGTGGGTTGCCCACCAGCACGGGCAATGTCGTGCGCTTCGAGTTGGAGGATATCGAGTCGAGGCATGCTGG
GCTGCCGTCGAAGGTGCGTCTGTCCTGGTACGGCGGCCCGCAAGTGCGGGCCGGCGAGCGCTGGCGGCTTGCGGCTCGAC
TGAAACGTCCGCGTGGCCTGGTCAATCCGCAAGCGTTCGACTACGAAGCCTGGTTGCTGGCGCGTCGCATTGGCGCGACC
GGTTCGGTCAAGGCGGGAGAGCGCCTCTTCGCGCCGCACTCAGTGAATAGTTGGCGCGACCGCTTGAGGCTCCGTCTGAT
GGAGGTCTCCGCGTCCGGTCGACAAGGCGCGATCGCGGCACTGGTGGTCGGTGATGACTCCGGCTTGAGCCGCCAGGATT
GGCAGGTGTTGCAGGACACCGGCACGGTGCACCTGATGGTCATATCCGGACAGCACATCGGCATGCTGGCTGGCTTGCTA
TACGGACTGGTTGCGCTAGCAGCTCGATGGGGCTTCTGGCCCAGCCGTTGGCCCTGGCTTCCATGCTCATGCGCGTTGGC
TCTCGCTGGTGCGCTTTCCTATGGATGGCTCGCGGGGTTCGATGTGCCGGTGCGTCGTGCGTGTCTCATGGTCGCCGTGG
TCCTGCTCTGGCGCTTGCGCTTTCGTCATCTAGGTGTCTGGCAGCCGCTGTTGCTGGCGCTGAATGGTGTCCTGCTGGTC
GATCCCCTGGTTACGCTGCAGCCGGGGTTTTGGCTCTCATTCGGGGCCGTTGCGGTGCTCGCGCTGGCGTTCTCCGGTCG
GCTCGGCCGATGGAAGTGGTGGGCGACGCTGACGCGCGCCCAATGGGCAGCTTCGCTCGGCCTGCTGCCTCTGTTACTGA
CGCTGGGACTGCCGGTCAGCGCCAGCGGGCCTTTGGCCAATCTGATTGCCGTACCCTGGGTAAGCCTCACCGTTCCCTTC
GCGCTGCTCGGTACGTTGCTTCTGCCGTTGGGCGCTATCGGCGAGACGCTACTCTGGTTGGTCGGCACCTCGCTGGCGCT
GCTGTTCGAGCTGCTGTCCGCCATGGCTACCTGGCAACCCGCCTGGCTGGCGGTCGGTATACCCATCTGGGCCTTACTGA
TGATTGGGCTGGGTGTGCTGTTGATGTTATTGCCGTCAGGTGTGCCGGTGCGTGCGCTCGGACTGGTGCTCCTGGCGCCG
TTGGTGTATCCACCGTATTCCGAAGTAGCCGAAGGACGTGCGCAGGTCTCCGTGCTGGATGTGGGGCAGGGGCTTTCGGT
ACTGGTGCGGACCCGGGAGCACGCGTTGCTCTACGATGCGGGACCGAGACAGGGTGATTTCGATACCGGCGAGCGTGTCG
TGTTCCCGTCGCTGCGAAGCCTGGGCGTGAAGAGGCTGGACATACTGCTGCTGAGCCATGCGGATAACGATCATTCCGGT
GGCGCTCAGGCGATCCGTCGACTGCTTCAGGTCGCGCGGACCGTCAGTGGGGAGCCGCAACGACATGCGACCGATCTGAA
TGCCAAGCCCTGTAAAAACGGTGCCGAGTGGCGGTGGAACGGCGTGCGTTTCAGTCTCTGGCAATGGCTGGCGGCCCGGG
AAAGCAATCAGACGTCATGCGTTCTGCTGGTCGAGGCCAATGGCGAACGGGTTCTGCTTACCGGCGATATCGATCAGGCC
GCGGAGCAGGCTTTGCTGCTCAGCGGACAGGACGTAAAGGCGCAGTGGTTGCTATTGCCTCATCACGGCAGCCGCAGCTC
ATCGTCGGAGCCATTCCTGCGAGCGGTGGAACCGAGCGCCGCGCTGATCTCACGCAGCCTGCACAACGCTTTCGGTCATC
CTCATCCGACTGTGACCGCTCGCCTCGAAGCGTCCGCGATCGACGTTTACGACACCGCCTTGCATGGCGCGATCCGCATC
GATCTCGGCGATTTCTCGGTGGCGGAGATACAGCGTGCGGAACGTCGGTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (22-168)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-683)

• Competence protein (Competence) (201-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	66.017	96.896	0.64
comA	Ralstonia pseudosolanacearum GMI1000	36.234	100	0.377