Detailed information NTG0615995

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NQZ80_RS22890
• Genome accession: NZ_CP102244
• Coordinates: 4816109..4817134 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli O7:H15 strain ST70
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4811109..4822134

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ80_RS22870 (NQZ80_22870)	metJ	4812294..4812611 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
NQZ80_RS22875 (NQZ80_22875)	yiiX	4812671..4813279 (+)	609	WP_024045098.1	YiiX family permuted papain-like enzyme	-
NQZ80_RS22880 (NQZ80_22880)	rpmE	4813340..4813552 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NQZ80_RS22885 (NQZ80_22885)	priA	4813755..4815953 (+)	2199	WP_001366767.1	primosomal protein N'	Machinery gene
NQZ80_RS22890 (NQZ80_22890)	cytR	4816109..4817134 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
NQZ80_RS22895 (NQZ80_22895)	ftsN	4817226..4818185 (+)	960	WP_000068834.1	cell division protein FtsN	-
NQZ80_RS22900 (NQZ80_22900)	hslV	4818278..4818808 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NQZ80_RS22905 (NQZ80_22905)	hslU	4818818..4820149 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
NQZ80_RS22910 (NQZ80_22910)	menA	4820216..4821142 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NQZ80_RS22915 (NQZ80_22915)	rraA	4821235..4821720 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NQZ80_RS22920 (NQZ80_22920)	zapB	4821805..4822050 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=615995 NQZ80_RS22890 WP_000644908.1 4816109..4817134(+) (cytR) [Escherichia coli O7:H15 strain ST70]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=615995 NQZ80_RS22890 WP_000644908.1 4816109..4817134(+) (cytR) [Escherichia coli O7:H15 strain ST70]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625