Detailed information NTG0615723

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: NQZ88_RS10645
• Genome accession: NZ_CP102152
• Coordinates: 2151357..2152451 (+)
• Length: 364 a.a.
• NCBI ID: WP_012028050.1
• Uniprot ID: A0A0H3N2H6
• Organism: Streptococcus suis strain DNS11
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2146357..2157451

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ88_RS10615 (NQZ88_10615)	-	2146817..2146975 (-)	159	Protein_2049	helix-turn-helix domain-containing protein	-
NQZ88_RS10620 (NQZ88_10620)	-	2147014..2147208 (-)	195	WP_032538261.1	helix-turn-helix transcriptional regulator	-
NQZ88_RS10625 (NQZ88_10625)	-	2147407..2148135 (+)	729	WP_228381569.1	helix-turn-helix transcriptional regulator	-
NQZ88_RS10630 (NQZ88_10630)	-	2148427..2149431 (+)	1005	WP_024381300.1	virulence RhuM family protein	-
NQZ88_RS10635 (NQZ88_10635)	-	2149661..2150833 (+)	1173	WP_024381301.1	site-specific integrase	-
NQZ88_RS10640 (NQZ88_10640)	yaaA	2150971..2151354 (+)	384	WP_012028049.1	S4 domain-containing protein YaaA	-
NQZ88_RS10645 (NQZ88_10645)	recF	2151357..2152451 (+)	1095	WP_012028050.1	DNA replication/repair protein RecF	Machinery gene
NQZ88_RS10650 (NQZ88_10650)	guaB	2152723..2154204 (-)	1482	WP_012028051.1	IMP dehydrogenase	-
NQZ88_RS10655 (NQZ88_10655)	trpS	2154436..2155461 (-)	1026	WP_012775414.1	tryptophan--tRNA ligase	-
NQZ88_RS10660 (NQZ88_10660)	-	2155816..2156688 (+)	873	WP_012775460.1	YitT family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42188.24 Da
• Isoelectric Point: 6.9173

>NTDB_id=615723 NQZ88_RS10645 WP_012028050.1 2151357..2152451(+) (recF) [Streptococcus suis strain DNS11]
MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGK
VPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNREELTIEYQTSIELTDDVNLIDKFLT
ELEKSRKRDLFKKNTGVGPHRDDVAFFINGMNAHYASQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQ
IKLLETITDTIQTFITTTSLDHLHKLPDSLKIFHIESGKVTESE

Nucleotide

• Length: 1095 bp

>NTDB_id=615723 NQZ88_RS10645 WP_012028050.1 2151357..2152451(+) (recF) [Streptococcus suis strain DNS11]
ATGTGGCTAGAACGATTAGAGTTACAACATTTTCGCAATTACAACCAATTAGATATTGAGTTCCACAAAGGGCTCAATGT
CTTTTTAGGCGAAAACGCCCAAGGAAAAACCAATATTCTAGAATCTATCTATGTTTTAGCCTTAACACGAAGTCATCGAA
CACGGACAGATAAGGACCTACTACAGTTTCAAGAAAAGGAATTATCTATTTCTGGTTTACTCCATCGCACAAGCGGTAAA
GTTCCCCTTGACATTCACTTGACAGACAAGGGACGAGTGACCAAGGTCAACCATCTCAAACAAGCCAAGCTTTCCAACTA
TATCGGCCACATGAATGTTGTTCTCTTCGCCCCTGAAGATTTACAGCTGATAAAAGGTGCGCCTGCTTTGAGAAGAAAGT
TCATCGATGTCGAGCTCGGGCAAATCAAGCCACTCTATCTCTCTGACCTATCGAATTATAACCACGTTTTAAAACAAAGA
AATACTTACCTCAAATCTACAGATAAGATTGATGAGAACTTCCTATCTGTGTTAGATCAGCAACTTGCTGAATATGGTAG
TCGTGTTATCCAACATCGTATTGACTTTCTAAAGAAATTAGAGGAATTCGGAAATAGAAAAGTTCAAGAAATATCTGGCA
ATCGGGAAGAATTGACAATCGAATACCAGACCTCAATCGAATTGACAGATGATGTCAATTTAATTGACAAATTCTTGACG
GAACTAGAAAAGTCTCGTAAACGTGATTTATTTAAGAAAAATACAGGAGTTGGACCACATCGAGATGATGTAGCTTTCTT
TATAAATGGAATGAATGCCCATTATGCTAGCCAAGGTCAGCACCGCAGTCTCGTTCTGTCACTCAAACTAGCTGAAATTG
AGCTGATGAAAGAAGTCACACGAGAGTACCCAATTCTACTCTTAGATGATGTTATGAGTGAGCTGGATAATAATCGTCAA
ATCAAACTATTAGAAACTATTACAGATACGATTCAAACATTTATTACAACGACATCTTTAGACCATTTACATAAGCTACC
TGATAGTTTAAAAATCTTCCATATTGAGTCTGGTAAGGTTACTGAGTCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: A0A0H3N2H6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	70.36	99.176	0.698
recF	Bacillus subtilis subsp. subtilis str. 168	43.514	100	0.442