Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   SII_RS08275 Genome accession   NC_022237
Coordinates   1716808..1718079 (-) Length   423 a.a.
NCBI ID   WP_020999183.1    Uniprot ID   -
Organism   Streptococcus intermedius C270     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1711808..1723079
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SII_RS08260 (SII_1628) - 1712517..1713821 (-) 1305 WP_020999180.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  SII_RS08265 (SII_1629) - 1714023..1714661 (-) 639 WP_020999181.1 hypothetical protein -
  SII_RS08270 (SII_1630) - 1714915..1716774 (-) 1860 WP_020999182.1 proline--tRNA ligase -
  SII_RS08275 (SII_1631) eeP 1716808..1718079 (-) 1272 WP_020999183.1 M50 family metallopeptidase Regulator
  SII_RS08280 (SII_1632) - 1718231..1719034 (-) 804 WP_020999184.1 phosphatidate cytidylyltransferase -
  SII_RS08285 (SII_1633) - 1719043..1719792 (-) 750 WP_003074042.1 isoprenyl transferase -
  SII_RS08290 (SII_1634) yajC 1720256..1720594 (-) 339 WP_003074039.1 preprotein translocase subunit YajC -

Sequence

Protein


Download         Length: 423 a.a.        Molecular weight: 45774.60 Da        Isoelectric Point: 9.6561

>NTDB_id=61553 SII_RS08275 WP_020999183.1 1716808..1718079(-) (eeP) [Streptococcus intermedius C270]
MQAGIIGIVTFIIIFGIIVVVHEFGHFYFAKKSGILVREFSIGMGPKIFAHIGKDGTAYTIRMLPLGGYVRMAGWGEDST
EIKTGTPASLSLNEAGKVIRINLSGKKIDQTALPMNVTSFDLENRLEIAGLVLDEQKTYAVDHDATIVEEDGTEIRIAPL
DVQYQNASLGGRLITNFAGPMNNFILGIVAFLLLIFMQGGVADQHTNHVRILQGSVLAQAGVKNNDQILKVGQAEIKNWS
DLTQAVQSETKASKGQAELTITVKSGNKIQKLTVKPKKEQGRYLLGVMPGLKSDLPSMIAGGFSMAWNASFRIFAALKNL
IFHPDINKLGGPVAIYKASSDAAKGGLESVIALLAMLSLNIGIFNLIPIPALDGGKIVLNLLEAIRRKPLKQETETYVTL
AGVAVMVVLLIAVTWNDIMRTFF

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=61553 SII_RS08275 WP_020999183.1 1716808..1718079(-) (eeP) [Streptococcus intermedius C270]
ATGCAAGCAGGTATTATAGGAATCGTTACCTTTATCATTATTTTTGGAATAATCGTTGTTGTTCATGAATTTGGGCATTT
CTATTTTGCGAAAAAATCAGGCATTTTGGTGCGCGAGTTTTCCATTGGAATGGGTCCGAAAATTTTTGCTCATATTGGCA
AAGATGGGACAGCATATACTATTCGGATGTTACCGCTTGGTGGATATGTCCGTATGGCTGGCTGGGGTGAAGACTCAACT
GAGATTAAAACAGGCACACCTGCTAGTTTATCTTTGAATGAAGCAGGAAAGGTTATCCGGATTAATCTTTCAGGCAAGAA
AATCGATCAGACGGCCCTACCGATGAATGTGACGAGTTTTGATTTGGAAAATAGACTTGAAATTGCGGGTCTGGTTCTAG
ATGAGCAGAAGACTTATGCAGTCGACCATGATGCAACCATCGTAGAAGAAGATGGAACAGAAATACGCATTGCTCCGCTC
GATGTTCAATATCAAAATGCTAGTTTAGGTGGTCGTCTCATTACCAACTTTGCGGGACCAATGAACAATTTCATTTTGGG
GATTGTAGCTTTTTTGCTGTTGATTTTTATGCAGGGTGGTGTTGCAGATCAACATACAAACCATGTTCGGATTTTACAGG
GTAGTGTCCTAGCTCAAGCCGGTGTAAAAAATAATGACCAAATTTTAAAAGTTGGTCAAGCAGAGATCAAGAATTGGTCA
GATTTGACTCAAGCTGTTCAGTCTGAGACGAAAGCTAGCAAAGGACAGGCAGAACTAACCATAACTGTTAAAAGTGGAAA
TAAAATTCAAAAGCTTACAGTTAAGCCCAAAAAAGAGCAAGGCAGATATTTATTAGGAGTAATGCCAGGCTTGAAGTCGG
ATCTTCCATCGATGATCGCAGGTGGGTTTAGCATGGCTTGGAATGCTAGCTTCCGCATCTTTGCAGCTTTGAAAAATTTG
ATTTTCCACCCAGATATCAATAAATTGGGGGGGCCTGTGGCCATTTACAAAGCTAGTAGTGATGCTGCCAAAGGTGGGCT
TGAAAGTGTTATCGCTCTATTGGCTATGCTTTCTCTAAACATCGGTATTTTTAATCTCATTCCTATTCCCGCACTTGATG
GTGGAAAGATTGTTCTCAACCTTCTTGAAGCTATTCGTCGCAAACCATTAAAGCAGGAGACAGAAACCTATGTCACTTTA
GCAGGTGTTGCTGTTATGGTGGTGCTGTTAATTGCAGTCACGTGGAATGATATTATGCGAACCTTTTTTTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(10-409)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

64.593

98.818

0.638
  eeP Streptococcus thermophilus LMD-9

64.354

98.818

0.636

Multiple sequence alignment