Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   NQZ91_RS09150 Genome accession   NZ_CP102145
Coordinates   1824009..1825055 (+) Length   348 a.a.
NCBI ID   WP_257104844.1    Uniprot ID   -
Organism   Streptococcus suis strain DNS20     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1819009..1830055
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ91_RS09120 (NQZ91_09120) tsaE 1819870..1820310 (+) 441 WP_172062408.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  NQZ91_RS09125 (NQZ91_09125) - 1820303..1820827 (+) 525 WP_257118060.1 GNAT family N-acetyltransferase -
  NQZ91_RS09130 (NQZ91_09130) - 1820827..1822026 (+) 1200 WP_257117402.1 LCP family protein -
  NQZ91_RS09135 (NQZ91_09135) - 1822486..1822800 (-) 315 WP_105111603.1 chemotaxis protein -
  NQZ91_RS09140 (NQZ91_09140) - 1822803..1823216 (-) 414 WP_105160222.1 HIT family protein -
  NQZ91_RS09145 (NQZ91_09145) pptA 1823278..1824012 (+) 735 WP_257104845.1 ABC transporter ATP-binding protein Regulator
  NQZ91_RS09150 (NQZ91_09150) pptB 1824009..1825055 (+) 1047 WP_257104844.1 ABC transporter permease Regulator
  NQZ91_RS09155 (NQZ91_09155) - 1825105..1825899 (+) 795 WP_172062316.1 phosphotransferase family protein -
  NQZ91_RS09160 (NQZ91_09160) trmB 1825896..1826531 (+) 636 WP_105111608.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  NQZ91_RS09165 (NQZ91_09165) rimP 1826692..1827162 (+) 471 WP_257117403.1 ribosome maturation factor RimP -
  NQZ91_RS09170 (NQZ91_09170) nusA 1827212..1828354 (+) 1143 WP_125266113.1 transcription termination factor NusA -
  NQZ91_RS09175 (NQZ91_09175) rnpM 1828371..1828667 (+) 297 WP_105111611.1 RNase P modulator RnpM -
  NQZ91_RS09180 (NQZ91_09180) - 1828624..1828962 (+) 339 WP_257117405.1 YlxQ-related RNA-binding protein -
  NQZ91_RS11175 - 1828980..1829706 (+) 727 Protein_1783 translation initiation factor IF-2 N-terminal domain-containing protein -

Sequence

Protein


Download         Length: 348 a.a.        Molecular weight: 40778.11 Da        Isoelectric Point: 10.0888

>NTDB_id=615510 NQZ91_RS09150 WP_257104844.1 1824009..1825055(+) (pptB) [Streptococcus suis strain DNS20]
MKTLFGQRKNLFLRQCATYLRYVLNDHFVLVVLVLFGFLALQYRQLLENLPSQSWLLYVILALVSLLLFLAGNVATYVEE
ADKIFLLSKEAEMPEIFFAANRRAFLVWASLQLVGQLILLPLYLKLKLPILLFIPLIFMLTIAKYFYFRWKLLAFMEEEK
VDWVRALQYESKRKTSILKFFSLFTNVKGLTSFVKRRSYLDGLLGHIKKETGFTWDYLFMRAFLRSGDYLSLALRLVILS
IVFFVTVRESWLSVGLASLFHYLLLFQLLPLYHAYDYQLMAELLPVGPDKRLISFKRVLRQILYLSLILQSVLGLLLLEE
KQYLLVFIGIGILLNQLYLDSKAKKLID

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=615510 NQZ91_RS09150 WP_257104844.1 1824009..1825055(+) (pptB) [Streptococcus suis strain DNS20]
ATGAAGACGCTCTTTGGTCAACGAAAAAATCTATTTTTAAGGCAGTGTGCAACCTATCTTCGTTATGTGCTGAATGACCA
CTTTGTTTTGGTTGTTTTGGTACTTTTTGGCTTTCTGGCGTTACAGTATCGGCAGTTGCTAGAAAACCTGCCCAGTCAGT
CCTGGTTGCTGTACGTTATTTTGGCCCTGGTCAGCTTGCTGCTATTCTTGGCAGGCAATGTTGCCACCTACGTAGAGGAG
GCTGATAAGATATTCCTACTATCAAAAGAAGCTGAAATGCCTGAAATCTTTTTTGCTGCCAATCGCAGGGCCTTTTTGGT
CTGGGCTAGCCTCCAACTTGTTGGTCAATTGATTCTACTCCCGCTCTACCTCAAATTAAAACTCCCTATTCTACTTTTTA
TTCCATTGATTTTCATGCTAACCATTGCCAAATATTTCTATTTTCGATGGAAACTCCTGGCCTTTATGGAAGAAGAAAAG
GTGGACTGGGTCCGGGCTCTTCAATATGAGAGCAAGAGAAAAACGTCGATATTGAAATTTTTCTCCCTCTTTACCAATGT
TAAGGGGCTGACTAGCTTTGTCAAACGTCGTTCCTATTTGGATGGGCTACTGGGTCATATCAAAAAAGAAACTGGCTTTA
CCTGGGACTATCTCTTCATGAGAGCCTTTTTGCGCAGTGGGGACTACCTTTCACTGGCTCTTAGACTGGTAATCTTATCC
ATTGTATTTTTTGTTACGGTGAGGGAATCCTGGCTCTCAGTAGGATTAGCCAGTTTATTTCATTATTTGCTCTTGTTCCA
ATTGCTCCCGCTCTATCACGCCTATGATTATCAACTGATGGCCGAGCTTTTGCCAGTCGGTCCAGACAAACGACTGATTA
GCTTTAAACGAGTCCTGCGACAGATTTTGTATCTTTCCTTGATTTTGCAGTCTGTGCTAGGCCTATTGCTGCTGGAGGAA
AAGCAGTATTTGCTGGTCTTTATTGGAATCGGAATTCTTTTAAATCAGCTCTACCTGGATAGTAAAGCGAAAAAATTGAT
TGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(2-153)

Bacterial ABC transporter protein EcsB (EcsB)

(132-331)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

44.253

100

0.443
  pptB Streptococcus salivarius strain HSISS4

44.253

100

0.443