Detailed information NTG0615429

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LIN94_RS02815
• Genome accession: NZ_CP085092
• Coordinates: 559455..560573 (+)
• Length: 372 a.a.
• NCBI ID: WP_005567106.1
• Uniprot ID: -
• Organism: Aggregatibacter actinomycetemcomitans strain 30R
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 554455..565573

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIN94_RS02790	lexA	557062..557685 (+)	624	WP_005544873.1	transcriptional repressor LexA	-
LIN94_RS02795	rpsF	557837..558214 (+)	378	WP_005541284.1	30S ribosomal protein S6	-
LIN94_RS02800	priB	558201..558527 (+)	327	WP_005567107.1	primosomal replication protein N	-
LIN94_RS02805	rpsR	558540..558770 (+)	231	WP_005541294.1	30S ribosomal protein S18	-
LIN94_RS02810	rplI	558786..559235 (+)	450	WP_005544876.1	50S ribosomal protein L9	-
LIN94_RS02815	dprA	559455..560573 (+)	1119	WP_005567106.1	DNA-processing protein DprA	Machinery gene
LIN94_RS02820	glpQ	560630..561712 (-)	1083	WP_005567105.1	glycerophosphodiester phosphodiesterase	-
LIN94_RS02825	glpT	561946..563388 (-)	1443	WP_005570215.1	glycerol-3-phosphate transporter	-
LIN94_RS02830	rlmB	563721..564458 (-)	738	WP_005544885.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41635.98 Da
• Isoelectric Point: 6.5725

>NTDB_id=615429 LIN94_RS02815 WP_005567106.1 559455..560573(+) (dprA) [Aggregatibacter actinomycetemcomitans strain 30R]
MNKHLALLLRLLQIPKLGPTTIHKILAQINLFELQYYDAAAFTQMGWNAQQIQAWFHPEQRYIEPALLWGEKEGNHILDY
FHPDYPELLKQIESAPPVLFVKGATSALSQQQIAIVGSRQCSSYGEYWAKYFATELTTNGFIITSGLALGIDGFCHQAVV
DLKQPTIAVLGSGLEEVYPAKHLKLAQNIIEHGGALVSEFFPLQPPIAENFPRRNRIISGLSLATLIIEATERSGSLITA
RYALEQKREIFALPGNIQSQFSQGCHKLIKQGAMLVENVEDILENLAPQMTWKKRPQNRPHFPAITKTTSASLPPPVTPS
HPELYNLIGYNPISADNLSTTLNLSIDQILIQLLELELQDLIISENGLYRRV

Nucleotide

• Length: 1119 bp

>NTDB_id=615429 LIN94_RS02815 WP_005567106.1 559455..560573(+) (dprA) [Aggregatibacter actinomycetemcomitans strain 30R]
ATGAACAAACATTTAGCACTTTTACTGCGCCTATTACAAATTCCCAAACTGGGTCCTACCACAATTCATAAAATCCTTGC
GCAAATCAATTTATTCGAATTGCAATATTACGACGCGGCTGCATTTACGCAAATGGGCTGGAACGCACAGCAAATTCAAG
CATGGTTTCATCCGGAACAGCGCTACATTGAACCGGCACTCTTGTGGGGAGAAAAAGAAGGGAATCATATTCTTGATTAT
TTTCACCCTGATTATCCCGAATTATTAAAACAAATCGAAAGCGCGCCGCCGGTATTGTTCGTCAAAGGCGCGACAAGTGC
GCTATCACAGCAACAAATCGCTATTGTCGGCAGCCGCCAATGTTCAAGTTACGGTGAATATTGGGCGAAATATTTTGCCA
CGGAATTAACCACCAATGGTTTCATCATTACCAGCGGGTTAGCATTAGGCATTGATGGTTTCTGTCATCAGGCTGTGGTC
GATTTAAAACAACCGACCATCGCGGTTTTAGGTAGCGGATTGGAAGAAGTGTATCCCGCCAAACATCTCAAATTAGCGCA
GAATATTATTGAACATGGCGGTGCGTTGGTTTCTGAATTTTTTCCGCTACAACCGCCTATTGCAGAAAATTTTCCCCGCC
GCAATCGCATTATCAGTGGGTTATCATTAGCAACCTTAATTATTGAAGCCACCGAACGTAGCGGATCATTAATTACAGCA
CGCTATGCATTAGAACAAAAGAGAGAAATTTTTGCACTACCGGGCAATATTCAAAGTCAGTTCAGCCAAGGTTGCCATAA
GCTTATTAAACAGGGCGCAATGCTGGTCGAAAACGTGGAAGATATTTTAGAAAATCTTGCGCCACAAATGACATGGAAAA
AACGCCCGCAAAATCGACCGCACTTTCCCGCTATAACGAAAACGACGTCCGCCTCATTACCACCCCCGGTCACACCGTCT
CATCCTGAGTTATATAATTTGATCGGTTATAATCCGATAAGCGCGGATAACTTATCAACCACCCTTAATTTGTCTATTGA
TCAAATTCTCATTCAACTGTTGGAACTGGAATTACAGGATTTAATTATCAGTGAGAACGGGTTATATCGGCGGGTTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (71-277)

• DprA winged helix domain (DprA_WH) (311-365)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	63.298	100	0.64
dprA	Glaesserella parasuis strain SC1401	54.261	94.624	0.513
dprA	Vibrio cholerae strain A1552	42.781	100	0.43
dprA	Vibrio campbellii strain DS40M4	43.207	98.925	0.427
dprA	Legionella pneumophila strain ERS1305867	40.541	99.462	0.403