Detailed information NTG0615383

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LIN96_RS02750
• Genome accession: NZ_CP085090
• Coordinates: 549922..551040 (+)
• Length: 372 a.a.
• NCBI ID: WP_005567106.1
• Uniprot ID: -
• Organism: Aggregatibacter actinomycetemcomitans strain 31R
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 544922..556040

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIN96_RS02725	lexA	547529..548152 (+)	624	WP_005544873.1	transcriptional repressor LexA	-
LIN96_RS02730	rpsF	548304..548681 (+)	378	WP_005541284.1	30S ribosomal protein S6	-
LIN96_RS02735	priB	548668..548994 (+)	327	WP_005567107.1	primosomal replication protein N	-
LIN96_RS02740	rpsR	549007..549237 (+)	231	WP_005541294.1	30S ribosomal protein S18	-
LIN96_RS02745	rplI	549253..549702 (+)	450	WP_005544876.1	50S ribosomal protein L9	-
LIN96_RS02750	dprA	549922..551040 (+)	1119	WP_005567106.1	DNA-processing protein DprA	Machinery gene
LIN96_RS02755	glpQ	551097..552179 (-)	1083	WP_005567105.1	glycerophosphodiester phosphodiesterase	-
LIN96_RS02760	glpT	552413..553855 (-)	1443	WP_005570215.1	glycerol-3-phosphate transporter	-
LIN96_RS02765	rlmB	554188..554925 (-)	738	WP_005544885.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41635.98 Da
• Isoelectric Point: 6.5725

>NTDB_id=615383 LIN96_RS02750 WP_005567106.1 549922..551040(+) (dprA) [Aggregatibacter actinomycetemcomitans strain 31R]
MNKHLALLLRLLQIPKLGPTTIHKILAQINLFELQYYDAAAFTQMGWNAQQIQAWFHPEQRYIEPALLWGEKEGNHILDY
FHPDYPELLKQIESAPPVLFVKGATSALSQQQIAIVGSRQCSSYGEYWAKYFATELTTNGFIITSGLALGIDGFCHQAVV
DLKQPTIAVLGSGLEEVYPAKHLKLAQNIIEHGGALVSEFFPLQPPIAENFPRRNRIISGLSLATLIIEATERSGSLITA
RYALEQKREIFALPGNIQSQFSQGCHKLIKQGAMLVENVEDILENLAPQMTWKKRPQNRPHFPAITKTTSASLPPPVTPS
HPELYNLIGYNPISADNLSTTLNLSIDQILIQLLELELQDLIISENGLYRRV

Nucleotide

• Length: 1119 bp

>NTDB_id=615383 LIN96_RS02750 WP_005567106.1 549922..551040(+) (dprA) [Aggregatibacter actinomycetemcomitans strain 31R]
ATGAACAAACATTTAGCACTTTTACTGCGCCTATTACAAATTCCCAAACTGGGTCCTACCACAATTCATAAAATCCTTGC
GCAAATCAATTTATTCGAATTGCAATATTACGACGCGGCTGCATTTACGCAAATGGGCTGGAACGCACAGCAAATTCAAG
CATGGTTTCATCCGGAACAGCGCTACATTGAACCGGCACTCTTGTGGGGAGAAAAAGAAGGGAATCATATTCTTGATTAT
TTTCACCCTGATTATCCCGAATTATTAAAACAAATCGAAAGCGCGCCGCCGGTATTGTTCGTCAAAGGCGCGACAAGTGC
GCTATCACAGCAACAAATCGCTATTGTCGGCAGCCGCCAATGTTCAAGTTACGGTGAATATTGGGCGAAATATTTTGCCA
CGGAATTAACCACCAATGGTTTCATCATTACCAGCGGGTTAGCATTAGGCATTGATGGTTTCTGTCATCAGGCTGTGGTC
GATTTAAAACAACCGACCATCGCGGTTTTAGGTAGCGGATTGGAAGAAGTGTATCCCGCCAAACATCTCAAATTAGCGCA
GAATATTATTGAACATGGCGGTGCGTTGGTTTCTGAATTTTTTCCGCTACAACCGCCTATTGCAGAAAATTTTCCCCGCC
GCAATCGCATTATCAGTGGGTTATCATTAGCAACCTTAATTATTGAAGCCACCGAACGTAGCGGGTCATTAATTACAGCA
CGCTATGCATTAGAACAAAAGAGAGAAATTTTTGCACTACCGGGCAATATTCAAAGTCAGTTCAGCCAAGGTTGCCATAA
GCTTATTAAACAGGGCGCAATGCTGGTCGAAAACGTGGAAGATATTTTAGAAAATCTTGCGCCACAAATGACATGGAAAA
AACGCCCGCAAAATCGACCGCACTTTCCCGCTATAACGAAAACGACGTCCGCCTCATTACCACCCCCGGTCACACCGTCT
CATCCTGAGTTATATAATTTGATCGGTTATAATCCGATAAGCGCGGATAACTTATCAACCACCCTTAATTTGTCTATTGA
TCAAATTCTCATTCAACTGTTGGAACTGGAATTACAGGATTTAATTATCAGTGAGAACGGGTTATATCGGCGGGTTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (71-277)

• DprA winged helix domain (DprA_WH) (311-365)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	63.298	100	0.64
dprA	Glaesserella parasuis strain SC1401	54.261	94.624	0.513
dprA	Vibrio cholerae strain A1552	42.781	100	0.43
dprA	Vibrio campbellii strain DS40M4	43.207	98.925	0.427
dprA	Legionella pneumophila strain ERS1305867	40.541	99.462	0.403