Detailed information NTG0615331

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: NQZ93_RS11480
• Genome accession: NZ_CP102141
• Coordinates: 2293063..2294157 (+)
• Length: 364 a.a.
• NCBI ID: WP_012028050.1
• Uniprot ID: A0A0H3N2H6
• Organism: Streptococcus suis strain DNR48
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2288063..2299157

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ93_RS11450 (NQZ93_11450)	-	2288693..2289019 (-)	327	WP_024381297.1	phage head closure protein	-
NQZ93_RS11455 (NQZ93_11455)	-	2289093..2289293 (-)	201	WP_024381298.1	helix-turn-helix transcriptional regulator	-
NQZ93_RS11460 (NQZ93_11460)	-	2289500..2290084 (+)	585	WP_024381299.1	helix-turn-helix domain-containing protein	-
NQZ93_RS11465 (NQZ93_11465)	-	2290377..2291381 (+)	1005	WP_024381300.1	virulence RhuM family protein	-
NQZ93_RS11470 (NQZ93_11470)	-	2291611..2292539 (+)	929	Protein_2209	tyrosine-type recombinase/integrase	-
NQZ93_RS11475 (NQZ93_11475)	yaaA	2292677..2293060 (+)	384	WP_012028049.1	S4 domain-containing protein YaaA	-
NQZ93_RS11480 (NQZ93_11480)	recF	2293063..2294157 (+)	1095	WP_012028050.1	DNA replication/repair protein RecF	Machinery gene
NQZ93_RS11485 (NQZ93_11485)	guaB	2294433..2295914 (-)	1482	WP_024378802.1	IMP dehydrogenase	-
NQZ93_RS11490 (NQZ93_11490)	trpS	2296146..2297171 (-)	1026	WP_024381302.1	tryptophan--tRNA ligase	-
NQZ93_RS11495 (NQZ93_11495)	-	2297526..2298398 (+)	873	WP_024381303.1	YitT family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42188.24 Da
• Isoelectric Point: 6.9173

>NTDB_id=615331 NQZ93_RS11480 WP_012028050.1 2293063..2294157(+) (recF) [Streptococcus suis strain DNR48]
MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGK
VPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNREELTIEYQTSIELTDDVNLIDKFLT
ELEKSRKRDLFKKNTGVGPHRDDVAFFINGMNAHYASQGQHRSLVLSLKLAEIELMKEVTREYPILLLDDVMSELDNNRQ
IKLLETITDTIQTFITTTSLDHLHKLPDSLKIFHIESGKVTESE

Nucleotide

• Length: 1095 bp

>NTDB_id=615331 NQZ93_RS11480 WP_012028050.1 2293063..2294157(+) (recF) [Streptococcus suis strain DNR48]
ATGTGGCTAGAACGATTAGAGTTACAACATTTTCGCAATTACAACCAATTAGATATTGAGTTCCACAAAGGGCTCAATGT
CTTTTTAGGCGAAAACGCCCAAGGAAAAACCAATATTCTAGAATCTATCTATGTTTTAGCCTTAACACGAAGTCATCGAA
CACGGACAGATAAGGACCTACTACAGTTTCAAGAAAAGGAATTATCTATTTCTGGTTTACTCCATCGCACAAGCGGTAAA
GTTCCCCTTGACATTCACTTGACAGACAAGGGACGAGTGACCAAGGTCAACCATCTCAAACAAGCCAAGCTTTCCAACTA
TATCGGCCACATGAATGTTGTTCTCTTCGCCCCTGAAGATTTACAGCTGATAAAAGGTGCGCCTGCTTTGAGAAGAAAGT
TCATCGATGTCGAGCTCGGGCAAATCAAGCCACTCTATCTCTCTGACCTATCGAATTATAACCACGTTTTAAAACAAAGA
AATACTTACCTCAAATCTACAGATAAGATTGATGAGAACTTCCTATCTGTGTTAGATCAGCAACTTGCTGAATATGGTAG
TCGTGTTATCCAACATCGTATTGACTTTCTAAAGAAATTAGAGGAATTCGGAAATAGAAAAGTTCAAGAAATATCTGGCA
ATCGGGAAGAATTGACAATCGAATACCAGACCTCAATCGAATTGACAGATGATGTCAATTTAATTGACAAATTCTTGACG
GAACTAGAAAAGTCTCGTAAACGTGATTTATTTAAGAAAAATACAGGAGTTGGACCACATCGAGATGATGTAGCTTTCTT
TATAAATGGAATGAATGCCCATTATGCTAGCCAAGGTCAGCACCGCAGTCTCGTTCTGTCACTCAAACTAGCTGAAATTG
AGCTGATGAAAGAAGTCACACGAGAGTACCCAATTCTACTCTTAGATGATGTTATGAGTGAGCTGGATAATAATCGTCAA
ATCAAACTATTAGAAACTATTACAGATACGATTCAAACATTTATTACAACGACATCTTTAGACCATTTACATAAGCTACC
TGATAGTTTAAAAATCTTCCATATTGAGTCTGGTAAGGTTACTGAGTCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: A0A0H3N2H6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	70.36	99.176	0.698
recF	Bacillus subtilis subsp. subtilis str. 168	43.514	100	0.442