Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   LIO32_RS09385 Genome accession   NZ_CP085087
Coordinates   1885485..1886744 (-) Length   419 a.a.
NCBI ID   WP_012027845.1    Uniprot ID   A0A0Z8VH60
Organism   Streptococcus suis strain Ssuis_MA2     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1880485..1891744
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LIO32_RS09360 dhaK 1880740..1881729 (+) 990 WP_172046071.1 dihydroxyacetone kinase subunit DhaK -
  LIO32_RS09365 dhaL 1881740..1882315 (+) 576 WP_023371632.1 dihydroxyacetone kinase subunit DhaL -
  LIO32_RS09370 dhaM 1882312..1882686 (+) 375 WP_023371633.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  LIO32_RS09375 - 1882696..1883406 (+) 711 WP_014736436.1 MIP/aquaporin family protein -
  LIO32_RS09380 - 1883486..1885348 (-) 1863 WP_024405894.1 proline--tRNA ligase -
  LIO32_RS09385 eeP 1885485..1886744 (-) 1260 WP_012027845.1 RIP metalloprotease Regulator
  LIO32_RS09390 - 1886754..1887560 (-) 807 WP_012027846.1 phosphatidate cytidylyltransferase -
  LIO32_RS09395 - 1887570..1888325 (-) 756 WP_012775352.1 isoprenyl transferase -
  LIO32_RS09400 yajC 1888439..1888762 (-) 324 WP_012775696.1 preprotein translocase subunit YajC -
  LIO32_RS09405 - 1888872..1890164 (-) 1293 WP_012775353.1 adenylosuccinate synthase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44889.21 Da        Isoelectric Point: 5.6974

>NTDB_id=615291 LIO32_RS09385 WP_012027845.1 1885485..1886744(-) (eeP) [Streptococcus suis strain Ssuis_MA2]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFILLFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNTTDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKNRHVSVTAEQVDGAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=615291 LIO32_RS09385 WP_012027845.1 1885485..1886744(-) (eeP) [Streptococcus suis strain Ssuis_MA2]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTCGCCAA
GAAAGCTGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACAGGTAAGGATGGGACAC
TTTACACCATCCGTATCCTTCCCCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCCTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTCGAGGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCACGATGCCACGATTGTAGAGGAAGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAATAT
CAAAATGCGACAGTCTGGGGACGGTTGATGACCAACTTTGCGGGTCCCATGAATAACTTTATTTTAGGGATTCTAGTATT
TATTCTTTTGTTCTTCATGCAAGGAGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCTGCAGGTGTTGTCACAGGGGACAAGATTCTTTCGGTCAATGGGAACACGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGTAAAGCAGCAACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTCGTTGAGCATGATGGGAAAAACCGTCA
TGTCTCCGTTACTGCTGAACAAGTAGATGGGGCCTATCGAATTGGTATTTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGAGCGACAGCTCTTAGGGTTGTAACAGCTTTGAAGAATCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTATAAAGTAAGTTCTCAAGCAGCTGAATTTGGTTTGGTTTCTGTATT
GGGGCTAATGGCTGCGCTCTCCATTAACCTTGGAATCTTCAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TTATGAATATTCTGGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0Z8VH60

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65

100

0.652

  eeP Streptococcus thermophilus LMD-9

65

100

0.652