Detailed information NTG0061511

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: EKM72_RS01570
• Genome accession: NZ_AP019305
• Coordinates: 301647..302921 (+)
• Length: 424 a.a.
• NCBI ID: WP_125571245.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain TUM9458
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 296647..307921

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EKM72_RS01540	-	296902..298044 (-)	1143	WP_000409157.1	cysteine desulfurase family protein	-
EKM72_RS01545	-	298202..299161 (-)	960	WP_002303350.1	IS30 family transposase	-
EKM72_RS01550	-	299422..300435 (+)	1014	WP_000985878.1	LLM class flavin-dependent oxidoreductase	-
EKM72_RS01555	-	300672..300818 (-)	147	WP_000009238.1	SAS049 family protein	-
EKM72_RS01560	-	300858..301040 (-)	183	WP_000752909.1	CsbD family protein	-
EKM72_RS01565	cymR	301140..301562 (-)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
EKM72_RS01570	rarA	301647..302921 (+)	1275	WP_125571245.1	replication-associated recombination protein A	Machinery gene
EKM72_RS01575	-	303082..303855 (-)	774	WP_000682646.1	tRNA threonylcarbamoyladenosine dehydratase	-
EKM72_RS01580	-	303855..303983 (-)	129	WP_001790559.1	hypothetical protein	-
EKM72_RS01590	aspS	304316..306082 (-)	1767	WP_000044799.1	aspartate--tRNA ligase	-
EKM72_RS01595	hisS	306098..307360 (-)	1263	WP_000590826.1	histidine--tRNA ligase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47252.82 Da
• Isoelectric Point: 8.3526

>NTDB_id=61511 EKM72_RS01570 WP_125571245.1 301647..302921(+) (rarA) [Staphylococcus aureus strain TUM9458]
MSTEPLASRMRPKNIDEIISQQHLVGPKSIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDDENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=61511 EKM72_RS01570 WP_125571245.1 301647..302921(+) (rarA) [Staphylococcus aureus strain TUM9458]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAAAAGCATTATCAGAAGAATGGTTGACACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTGTTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATTGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGATGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGCCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGTCAAATTCCAAATCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (175-253)

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.048	99.057	0.684