Detailed information NTG0614941

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: NQZ97_RS11715
• Genome accession: NZ_CP102136
• Coordinates: 2393252..2394346 (+)
• Length: 364 a.a.
• NCBI ID: WP_043025496.1
• Uniprot ID: -
• Organism: Streptococcus suis strain M105052_S26
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2388252..2399346

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQZ97_RS11680 (NQZ97_11680)	-	2388445..2388777 (-)	333	WP_043025503.1	hypothetical protein	-
NQZ97_RS11685 (NQZ97_11685)	-	2388939..2389265 (-)	327	WP_043025501.1	phage head closure protein	-
NQZ97_RS11690 (NQZ97_11690)	-	2389281..2389907 (-)	627	WP_043025499.1	Rha family transcriptional regulator	-
NQZ97_RS11695 (NQZ97_11695)	-	2389926..2390123 (-)	198	WP_002941765.1	helix-turn-helix transcriptional regulator	-
NQZ97_RS11700 (NQZ97_11700)	-	2390333..2390827 (+)	495	WP_079395284.1	helix-turn-helix transcriptional regulator	-
NQZ97_RS11705 (NQZ97_11705)	-	2391623..2392768 (+)	1146	WP_043025498.1	site-specific integrase	-
NQZ97_RS11710 (NQZ97_11710)	yaaA	2392866..2393249 (+)	384	WP_043025497.1	S4 domain-containing protein YaaA	-
NQZ97_RS11715 (NQZ97_11715)	recF	2393252..2394346 (+)	1095	WP_043025496.1	DNA replication/repair protein RecF	Machinery gene
NQZ97_RS11720 (NQZ97_11720)	guaB	2394617..2396098 (-)	1482	WP_105130833.1	IMP dehydrogenase	-
NQZ97_RS11725 (NQZ97_11725)	trpS	2396327..2397352 (-)	1026	WP_002941757.1	tryptophan--tRNA ligase	-
NQZ97_RS11730 (NQZ97_11730)	-	2397707..2398579 (+)	873	WP_013730698.1	YitT family protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42232.31 Da
• Isoelectric Point: 6.7883

>NTDB_id=614941 NQZ97_RS11715 WP_043025496.1 2393252..2394346(+) (recF) [Streptococcus suis strain M105052_S26]
MWLERLELQHFRNYNQLDIEFHKGLNVFLGENAQGKTNILESIYVLALTRSHRTRTDKDLLQFQEKELSISGLLHRTSGK
VPLDIHLTDKGRVTKVNHLKQAKLSNYIGHMNVVLFAPEDLQLIKGAPALRRKFIDVELGQIKPLYLSDLSNYNHVLKQR
NTYLKSTDKIDENFLSVLDQQLAEYGSRVIQHRIDFLKKLEEFGNRKVQEISGNREELTIEYQTSIELTDDVNLIDKFLT
ELERCRKRDLFKKNTGVGPHRDDISFFINGMNAHYGSQGQHRSLVLSLKLAEIELMKEVTLEYPILLLDDVMSELDNNRQ
IKLLETITDTIQTFITTTSLDHLHKLPDNLKIFHIESGKVTESE

Nucleotide

• Length: 1095 bp

>NTDB_id=614941 NQZ97_RS11715 WP_043025496.1 2393252..2394346(+) (recF) [Streptococcus suis strain M105052_S26]
ATGTGGCTAGAACGATTAGAGTTACAACATTTTCGCAATTACAACCAATTAGATATTGAGTTCCACAAAGGGCTCAATGT
CTTTTTAGGCGAAAACGCCCAAGGAAAAACCAATATTCTAGAATCTATCTATGTTTTAGCCTTAACACGAAGTCATCGAA
CACGGACAGATAAGGACCTACTACAGTTTCAAGAAAAGGAATTATCTATTTCTGGTTTACTCCATCGCACAAGCGGTAAA
GTTCCCCTTGACATTCACTTGACAGACAAGGGGCGAGTGACCAAGGTCAACCATCTCAAACAAGCCAAGCTTTCCAACTA
TATCGGCCACATGAATGTTGTTCTCTTCGCCCCTGAAGATTTACAGCTGATAAAAGGTGCGCCTGCTTTGAGAAGAAAGT
TCATCGATGTCGAGCTCGGGCAAATCAAGCCACTCTATCTCTCTGACCTATCGAATTATAACCACGTTCTAAAACAAAGA
AATACTTACCTCAAATCTACAGATAAGATTGATGAGAACTTCCTATCCGTGTTAGATCAGCAACTTGCTGAATATGGTAG
TCGTGTTATCCAACATCGTATTGACTTTCTAAAGAAATTAGAGGAATTTGGAAATAGAAAAGTTCAAGAAATATCTGGTA
ATCGGGAAGAATTGACAATCGAATACCAAACCTCAATCGAATTGACAGATGATGTCAATTTAATTGACAAATTCTTGACA
GAATTGGAAAGGTGTCGCAAACGTGATTTATTTAAGAAAAATACAGGAGTTGGACCACATCGAGATGATATATCTTTCTT
TATAAACGGAATGAATGCCCATTATGGGAGTCAAGGCCAACACCGTAGTCTCGTTCTGTCACTCAAACTAGCTGAAATTG
AGCTGATGAAGGAAGTTACACTAGAATATCCAATTCTACTTTTAGACGATGTTATGAGTGAGCTGGATAATAATCGTCAA
ATCAAACTACTAGAAACTATTACAGATACGATTCAAACATTTATTACAACGACATCTTTAGACCATTTACATAAGCTACC
TGATAATTTAAAAATCTTCCATATTGAGTCTGGTAAGGTTACTGAGTCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	70.914	99.176	0.703
recF	Bacillus subtilis subsp. subtilis str. 168	43.243	100	0.44