Detailed information NTG0061488

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: EL334_RS11630
• Genome accession: NZ_AP019192
• Coordinates: 2140155..2141252 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266660.1
• Uniprot ID: Q97N44
• Organism: Streptococcus pneumoniae strain ASP0581
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2135155..2146252

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL334_RS11605 (ASP0581_21430)	pgsA	2135676..2136221 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
EL334_RS11610 (ASP0581_21440)	rodZ	2136232..2137053 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
EL334_RS11615 (ASP0581_21450)	yfmH	2137095..2138378 (-)	1284	WP_000170195.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
EL334_RS11620 (ASP0581_21460)	yfmF	2138375..2139625 (-)	1251	WP_000424263.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
EL334_RS11625 (ASP0581_21470)	yaaA	2139784..2140152 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
EL334_RS11630 (ASP0581_21480)	recF	2140155..2141252 (+)	1098	WP_000266660.1	DNA replication/repair protein RecF	Machinery gene
EL334_RS11635 (ASP0581_21490)	guaB	2141303..2142781 (-)	1479	WP_033705082.1	IMP dehydrogenase	-
EL334_RS11640 (ASP0581_21500)	trpS	2142934..2143959 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
EL334_RS11645 (ASP0581_21510)	-	2144165..2145787 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41900.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=61488 EL334_RS11630 WP_000266660.1 2140155..2141252(+) (recF) [Streptococcus pneumoniae strain ASP0581]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=61488 EL334_RS11630 WP_000266660.1 2140155..2141252(+) (recF) [Streptococcus pneumoniae strain ASP0581]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCTATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q97N44

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.726	100	0.997
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46