Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   NQZ98_RS05015 Genome accession   NZ_CP102135
Coordinates   984988..985653 (-) Length   221 a.a.
NCBI ID   WP_257116688.1    Uniprot ID   -
Organism   Streptococcus suis strain M106471_S40     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 979988..990653
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NQZ98_RS04995 (NQZ98_04995) - 980627..981148 (+) 522 WP_024400576.1 AAA family ATPase -
  NQZ98_RS05000 (NQZ98_05000) xerS 981326..982396 (+) 1071 WP_044689537.1 tyrosine recombinase XerS Machinery gene
  NQZ98_RS05005 (NQZ98_05005) - 982466..983974 (-) 1509 WP_257116686.1 phosphomannomutase/phosphoglucomutase -
  NQZ98_RS05010 (NQZ98_05010) - 984050..984991 (-) 942 WP_257116687.1 sensor histidine kinase -
  NQZ98_RS05015 (NQZ98_05015) braR 984988..985653 (-) 666 WP_257116688.1 response regulator transcription factor Regulator
  NQZ98_RS05020 (NQZ98_05020) - 985695..985961 (-) 267 WP_024405694.1 type II toxin-antitoxin system RelE/ParE family toxin -
  NQZ98_RS05025 (NQZ98_05025) relB 985945..986196 (-) 252 WP_044759715.1 type II toxin-antitoxin system RelB family antitoxin -
  NQZ98_RS05030 (NQZ98_05030) - 986544..988514 (-) 1971 WP_257116689.1 ABC transporter permease -
  NQZ98_RS05035 (NQZ98_05035) - 988515..989267 (-) 753 WP_029173099.1 ABC transporter ATP-binding protein -
  NQZ98_RS05040 (NQZ98_05040) - 989276..989665 (-) 390 WP_257116690.1 NisI/SpaI family lantibiotic immunity lipoprotein -
  NQZ98_RS05045 (NQZ98_05045) - 989678..989818 (-) 141 WP_044773499.1 hypothetical protein -
  NQZ98_RS05050 (NQZ98_05050) - 989917..990516 (-) 600 WP_306455325.1 TraX family protein -
  NQZ98_RS05055 (NQZ98_05055) - 990402..990641 (-) 240 WP_257116692.1 hypothetical protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25477.20 Da        Isoelectric Point: 4.6919

>NTDB_id=614799 NQZ98_RS05015 WP_257116688.1 984988..985653(-) (braR) [Streptococcus suis strain M106471_S40]
MKKEKIYIVEDDEMIVQLLKQHLEKSYQVESVQNFRAVSQEVAEIKPDLVLMDISLPYYNGFYWTTEIRKTMTMPIIFIS
SSDDEMNAVMAMNMGGDDFVSKPFSLGILDAKIGAFLRRVNQFSKSTDLSIDQFQLSLDGRFTNESEQVQLSPTETKILS
ALLERQGQIVSKDELLEKLWENEEFIDQNTLNVNMSRLRKKVSEVGFDRIHTVRGVGYLVK

Nucleotide


Download         Length: 666 bp        

>NTDB_id=614799 NQZ98_RS05015 WP_257116688.1 984988..985653(-) (braR) [Streptococcus suis strain M106471_S40]
ATGAAAAAAGAAAAGATTTATATTGTTGAAGATGATGAGATGATTGTCCAGCTCTTGAAGCAACACCTGGAAAAATCTTA
TCAGGTAGAAAGTGTGCAGAATTTCCGAGCTGTCAGTCAGGAAGTGGCTGAAATCAAACCAGACTTAGTGCTGATGGATA
TTAGCCTGCCTTATTACAACGGCTTTTACTGGACGACAGAAATCCGTAAAACCATGACCATGCCCATTATCTTTATCTCC
TCTAGCGATGATGAGATGAATGCAGTCATGGCTATGAACATGGGTGGTGATGATTTTGTGTCCAAGCCATTTTCACTTGG
GATTTTGGATGCCAAAATCGGTGCCTTCCTACGTCGGGTTAATCAATTCAGCAAATCAACTGATTTGTCTATCGACCAGT
TTCAACTCAGTTTAGACGGGCGATTTACAAACGAATCAGAACAGGTTCAATTGTCTCCTACGGAAACCAAGATTTTGTCC
GCCTTGCTAGAAAGACAAGGGCAGATTGTTAGCAAGGATGAACTCTTGGAAAAACTTTGGGAAAATGAAGAATTTATCGA
CCAAAATACGCTCAATGTAAACATGAGTCGTCTGCGTAAGAAGGTAAGTGAAGTTGGTTTTGACCGTATTCATACTGTTC
GTGGCGTGGGGTACTTGGTCAAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.273

99.548

0.471