Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | LG951_RS00585 | Genome accession | NZ_CP085037 |
| Coordinates | 106686..109121 (+) | Length | 811 a.a. |
| NCBI ID | WP_003216969.1 | Uniprot ID | - |
| Organism | Bacillus pumilus strain BIM B-171 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 101686..114121
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LG951_RS00570 (LG951_00570) | - | 104557..105021 (+) | 465 | WP_003217184.1 | CtsR family transcriptional regulator | - |
| LG951_RS00575 (LG951_00575) | - | 105036..105593 (+) | 558 | WP_034620770.1 | UvrB/UvrC motif-containing protein | - |
| LG951_RS00580 (LG951_00580) | - | 105598..106689 (+) | 1092 | WP_003217181.1 | protein arginine kinase | - |
| LG951_RS00585 (LG951_00585) | clpC | 106686..109121 (+) | 2436 | WP_003216969.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| LG951_RS00590 (LG951_00590) | radA | 109214..110593 (+) | 1380 | WP_034620767.1 | DNA repair protein RadA | Machinery gene |
| LG951_RS00595 (LG951_00595) | disA | 110596..111675 (+) | 1080 | WP_050945822.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| LG951_RS00600 (LG951_00600) | - | 111829..112929 (+) | 1101 | WP_003217214.1 | PIN/TRAM domain-containing protein | - |
| LG951_RS00605 (LG951_00605) | ispD | 112943..113632 (+) | 690 | WP_003217158.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| LG951_RS00610 (LG951_00610) | ispF | 113636..114112 (+) | 477 | WP_003216928.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90030.78 Da Isoelectric Point: 6.1821
>NTDB_id=614794 LG951_RS00585 WP_003216969.1 106686..109121(+) (clpC) [Bacillus pumilus strain BIM B-171]
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQQIVLDVEDG
EIVVKTTAATN
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQQIVLDVEDG
EIVVKTTAATN
Nucleotide
Download Length: 2436 bp
>NTDB_id=614794 LG951_RS00585 WP_003216969.1 106686..109121(+) (clpC) [Bacillus pumilus strain BIM B-171]
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATTGGTACTGAACACATTTTACTTGGTCTAGTTCGTGAGGGTGAGGGCATCGCCGCAAAAGCGTTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCAATGGATGAAGCAAGAAAGCTAGGTCATTCCTATGTAGGGACAGA
ACATATTCTATTAGGTCTTATTCGCGAGGGAGAGGGTGTAGCTGCCCGCGTGTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTCCTGCAGCTGCTTGGCAGCAATGAAACAGGTGCATCTGCCGCTGGCTCTAACAGCAATGCAAAT
ACACCAACATTAGATAGCTTGGCAAGAGATTTAACAGCGATTGCGAAAGAAGATAGCTTGGACCCTGTTATTGGACGAAG
CAAAGAAATTCAGCGTGTCATCGAGGTTTTAAGCAGAAGAACAAAGAATAACCCTGTGCTGATTGGTGAGCCTGGTGTTG
GTAAAACAGCCATTGCTGAAGGTCTGGCACAGCAAATTATTCATAATGAAGTGCCTGAAATCCTGCGCGATAAACGAGTG
ATGACGCTTGATATGGGAACTGTTGTAGCGGGAACGAAATATCGTGGTGAATTTGAGGATCGCTTGAAAAAAGTCATGGA
CGAAATTCGTCAGGCAGGAAATATCATTCTCTTCATTGATGAGCTTCATACATTGATTGGTGCTGGTGGAGCAGAGGGTG
CGATTGACGCATCTAATATTCTCAAACCATCCTTAGCACGTGGAGAGCTTCAATGTATTGGGGCGACAACGTTAGATGAG
TACCGTAAATATATTGAAAAGGATGCTGCGCTTGAACGACGTTTCCAGCCAATTCAAGTAGATCAGCCATCTGTTGATGA
AAGTATTCAAATTTTAAGAGGACTTCGAGATCGTTATGAGGCACATCACCGTGTGTCCATTACAGATGAAGCGATTGAGG
CGGCGGTGAAGTTATCTGACCGTTATATATCTGATCGTTTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGG
TCGAAAGTCCGCTTACGTTCTTTCACAACACCGCCTAACCTAAAAGAACTAGAGCAAAAGCTAGATGAAGTACGCAAGGA
AAAGGATGCGGCTGTTCAAAGTCAGGAATTTGAAAAAGCAGCTTCTCTTCGCGATACAGAGCAGCGTTTGCGTGAAAAAG
TAGAAGTCACAAAGAAATCTTGGAAAGAAAAGCAAGGTCAGGAGAATTCAGAGGTATCAGTGGATGATATCGCAATGGTT
GTCTCTAGCTGGACGGGAGTGCCTGTTTCAAAAATTGCCCAAACCGAAACAGATAAGCTTCTAAATATGGAACAATTACT
CCATTCTCGTGTAATTGGGCAGGATGAAGCGGTTGTCGCTGTAGCAAAAGCTGTGAGACGTGCGCGTGCTGGCTTAAAAG
ATCCAAAACGTCCAATCGGCTCATTTATCTTCTTAGGCCCAACAGGAGTTGGTAAAACGGAGCTTGCAAGAGCACTCGCA
GAGTCTATTTTCGGTGATGAAGAAGCGATGATCCGTATCGATATGTCTGAATACATGGAGAAACACTCTACATCTAGACT
TGTTGGGTCACCTCCAGGCTATGTTGGCTATGAAGAAGGCGGACAACTGACTGAAAAAGTGAGAAGAAAACCTTATTCTG
TTGTGCTTTTAGATGAGATTGAAAAGGCGCATCCAGATGTATTCAACATCTTACTGCAAGTGTTAGAGGATGGTCGTCTG
ACTGATTCTAAAGGGCGTACTGTTGACTTTAGAAACACGATTTTAATCATGACATCCAACGTTGGAGCTAGTGAACTGAA
GCGAAATAAATATGTTGGCTTTAACGTGCAGGATGAAGGTCAAAATTACAAGGATATGAAAGGCAAAGTGATGGGCGAGT
TGAAACGTGCATTTAGACCAGAATTCATCAACCGTATTGATGAAATCATTGTCTTCCATTCACTTGAAAAGAAACATCTA
AAAGAGATCGTGTCTCTCATGTCAGATCAATTGACGAAACGATTAAAAGAACAAGACCTTTCAATCGAATTGACAGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGTGTAGACCTTGAGTACGGTGCGCGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TGGAAGATCGACTTTCTGAGGAGCTTCTGAAGGGCAATATTGAAAAAGGTCAACAAATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAACGACGGCTGCTACGAACTAA
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATTGGTACTGAACACATTTTACTTGGTCTAGTTCGTGAGGGTGAGGGCATCGCCGCAAAAGCGTTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCAATGGATGAAGCAAGAAAGCTAGGTCATTCCTATGTAGGGACAGA
ACATATTCTATTAGGTCTTATTCGCGAGGGAGAGGGTGTAGCTGCCCGCGTGTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTCCTGCAGCTGCTTGGCAGCAATGAAACAGGTGCATCTGCCGCTGGCTCTAACAGCAATGCAAAT
ACACCAACATTAGATAGCTTGGCAAGAGATTTAACAGCGATTGCGAAAGAAGATAGCTTGGACCCTGTTATTGGACGAAG
CAAAGAAATTCAGCGTGTCATCGAGGTTTTAAGCAGAAGAACAAAGAATAACCCTGTGCTGATTGGTGAGCCTGGTGTTG
GTAAAACAGCCATTGCTGAAGGTCTGGCACAGCAAATTATTCATAATGAAGTGCCTGAAATCCTGCGCGATAAACGAGTG
ATGACGCTTGATATGGGAACTGTTGTAGCGGGAACGAAATATCGTGGTGAATTTGAGGATCGCTTGAAAAAAGTCATGGA
CGAAATTCGTCAGGCAGGAAATATCATTCTCTTCATTGATGAGCTTCATACATTGATTGGTGCTGGTGGAGCAGAGGGTG
CGATTGACGCATCTAATATTCTCAAACCATCCTTAGCACGTGGAGAGCTTCAATGTATTGGGGCGACAACGTTAGATGAG
TACCGTAAATATATTGAAAAGGATGCTGCGCTTGAACGACGTTTCCAGCCAATTCAAGTAGATCAGCCATCTGTTGATGA
AAGTATTCAAATTTTAAGAGGACTTCGAGATCGTTATGAGGCACATCACCGTGTGTCCATTACAGATGAAGCGATTGAGG
CGGCGGTGAAGTTATCTGACCGTTATATATCTGATCGTTTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGG
TCGAAAGTCCGCTTACGTTCTTTCACAACACCGCCTAACCTAAAAGAACTAGAGCAAAAGCTAGATGAAGTACGCAAGGA
AAAGGATGCGGCTGTTCAAAGTCAGGAATTTGAAAAAGCAGCTTCTCTTCGCGATACAGAGCAGCGTTTGCGTGAAAAAG
TAGAAGTCACAAAGAAATCTTGGAAAGAAAAGCAAGGTCAGGAGAATTCAGAGGTATCAGTGGATGATATCGCAATGGTT
GTCTCTAGCTGGACGGGAGTGCCTGTTTCAAAAATTGCCCAAACCGAAACAGATAAGCTTCTAAATATGGAACAATTACT
CCATTCTCGTGTAATTGGGCAGGATGAAGCGGTTGTCGCTGTAGCAAAAGCTGTGAGACGTGCGCGTGCTGGCTTAAAAG
ATCCAAAACGTCCAATCGGCTCATTTATCTTCTTAGGCCCAACAGGAGTTGGTAAAACGGAGCTTGCAAGAGCACTCGCA
GAGTCTATTTTCGGTGATGAAGAAGCGATGATCCGTATCGATATGTCTGAATACATGGAGAAACACTCTACATCTAGACT
TGTTGGGTCACCTCCAGGCTATGTTGGCTATGAAGAAGGCGGACAACTGACTGAAAAAGTGAGAAGAAAACCTTATTCTG
TTGTGCTTTTAGATGAGATTGAAAAGGCGCATCCAGATGTATTCAACATCTTACTGCAAGTGTTAGAGGATGGTCGTCTG
ACTGATTCTAAAGGGCGTACTGTTGACTTTAGAAACACGATTTTAATCATGACATCCAACGTTGGAGCTAGTGAACTGAA
GCGAAATAAATATGTTGGCTTTAACGTGCAGGATGAAGGTCAAAATTACAAGGATATGAAAGGCAAAGTGATGGGCGAGT
TGAAACGTGCATTTAGACCAGAATTCATCAACCGTATTGATGAAATCATTGTCTTCCATTCACTTGAAAAGAAACATCTA
AAAGAGATCGTGTCTCTCATGTCAGATCAATTGACGAAACGATTAAAAGAACAAGACCTTTCAATCGAATTGACAGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGTGTAGACCTTGAGTACGGTGCGCGTCCGTTAAGAAGAGCGATTCAAAAGCATG
TGGAAGATCGACTTTCTGAGGAGCTTCTGAAGGGCAATATTGAAAAAGGTCAACAAATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAACGACGGCTGCTACGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
95.931 |
100 |
0.959 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.136 |
99.877 |
0.491 |
| clpC | Streptococcus thermophilus LMD-9 |
46.247 |
100 |
0.471 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.884 |
100 |
0.467 |
| clpC | Streptococcus pneumoniae Rx1 |
45.802 |
99.877 |
0.457 |
| clpC | Streptococcus pneumoniae D39 |
45.802 |
99.877 |
0.457 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.802 |
99.877 |
0.457 |
| clpC | Streptococcus mutans UA159 |
43.675 |
100 |
0.451 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.509 |
87.916 |
0.435 |
| clpE | Streptococcus mutans UA159 |
53.478 |
79.778 |
0.427 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae D39 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae R6 |
52.713 |
79.531 |
0.419 |