Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | LG319_RS06155 | Genome accession | NZ_CP085027 |
| Coordinates | 1217224..1218198 (+) | Length | 324 a.a. |
| NCBI ID | WP_037550626.1 | Uniprot ID | - |
| Organism | Staphylococcus haemolyticus strain SLM-175 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1212224..1223198
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LG319_RS06120 (LG319_06090) | rpmG | 1212656..1212805 (+) | 150 | WP_011275661.1 | 50S ribosomal protein L33 | - |
| LG319_RS06125 (LG319_06095) | - | 1213042..1213578 (+) | 537 | WP_037550637.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| LG319_RS06130 (LG319_06100) | - | 1213594..1215051 (+) | 1458 | WP_404412523.1 | rhomboid family intramembrane serine protease | - |
| LG319_RS06135 (LG319_06105) | - | 1215035..1215238 (+) | 204 | WP_037550632.1 | YqgQ family protein | - |
| LG319_RS06140 (LG319_06110) | - | 1215235..1216221 (+) | 987 | WP_037550630.1 | ROK family glucokinase | - |
| LG319_RS06145 (LG319_06115) | - | 1216221..1216544 (+) | 324 | WP_011275666.1 | MTH1187 family thiamine-binding protein | - |
| LG319_RS06150 (LG319_06120) | - | 1216546..1217172 (+) | 627 | WP_037550628.1 | MBL fold metallo-hydrolase | - |
| LG319_RS06155 (LG319_06125) | comGA | 1217224..1218198 (+) | 975 | WP_037550626.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| LG319_RS06160 (LG319_06130) | comGB | 1218170..1219234 (+) | 1065 | WP_053024492.1 | competence type IV pilus assembly protein ComGB | - |
| LG319_RS06165 (LG319_06135) | comGC | 1219248..1219568 (+) | 321 | WP_011275670.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| LG319_RS06170 (LG319_06140) | comGD | 1219549..1220001 (+) | 453 | WP_226956186.1 | competence type IV pilus minor pilin ComGD | - |
| LG319_RS06175 (LG319_06145) | - | 1219982..1220281 (+) | 300 | WP_053024491.1 | hypothetical protein | - |
| LG319_RS06180 | - | 1220199..1220690 (+) | 492 | WP_037550614.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| LG319_RS06185 (LG319_06150) | - | 1220894..1221367 (+) | 474 | WP_053024489.1 | shikimate kinase | - |
| LG319_RS06190 (LG319_06155) | gcvT | 1221556..1222647 (+) | 1092 | WP_053024487.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37123.10 Da Isoelectric Point: 8.4405
>NTDB_id=614725 LG319_RS06155 WP_037550626.1 1217224..1218198(+) (comGA) [Staphylococcus haemolyticus strain SLM-175]
MKLLFREIVNKAISKNASDIHFIPSVDEVHIKFRINDYLELYEIFNLDVYQKLLVFMKFKSGLDVSSQQSAQSGRYTYQS
KSTFYLRISTLPLSLGVESCVIRIIPQYFQAKKEYKEFNDFKHLVNKKQGLILLTGPTGSGKSTLMYQMVLHAYKELNLN
VITIENPVEQLLKGITQISINKKAGIDYISSFKAILRCDPDIILIGEIRDAEVAKCVIQASLSGHLVLSTMHSTNCRGAL
LRLLEMGISIQELTQSINIISNQRLITTTQNERRLICETIDKKQIQYFFEHEQTMPLNFNNLEQQLNLLSKEGTICEDTA
SKYF
MKLLFREIVNKAISKNASDIHFIPSVDEVHIKFRINDYLELYEIFNLDVYQKLLVFMKFKSGLDVSSQQSAQSGRYTYQS
KSTFYLRISTLPLSLGVESCVIRIIPQYFQAKKEYKEFNDFKHLVNKKQGLILLTGPTGSGKSTLMYQMVLHAYKELNLN
VITIENPVEQLLKGITQISINKKAGIDYISSFKAILRCDPDIILIGEIRDAEVAKCVIQASLSGHLVLSTMHSTNCRGAL
LRLLEMGISIQELTQSINIISNQRLITTTQNERRLICETIDKKQIQYFFEHEQTMPLNFNNLEQQLNLLSKEGTICEDTA
SKYF
Nucleotide
Download Length: 975 bp
>NTDB_id=614725 LG319_RS06155 WP_037550626.1 1217224..1218198(+) (comGA) [Staphylococcus haemolyticus strain SLM-175]
TTGAAACTATTATTCAGAGAGATAGTTAATAAAGCTATTTCAAAAAATGCGAGCGACATACATTTTATCCCTTCAGTTGA
TGAAGTTCATATTAAATTTAGAATTAATGATTATCTTGAACTTTATGAAATATTCAACTTAGATGTATATCAAAAATTAT
TAGTTTTTATGAAGTTCAAATCAGGTTTGGACGTTTCATCTCAACAATCCGCTCAAAGTGGTCGTTATACTTATCAATCT
AAATCTACTTTTTATTTACGGATTTCAACATTACCTTTGTCTTTAGGTGTAGAAAGTTGTGTAATTAGGATAATTCCTCA
ATATTTTCAAGCAAAAAAAGAATATAAAGAATTTAACGATTTTAAACACTTAGTAAATAAAAAACAGGGATTAATTCTAT
TAACTGGACCCACAGGATCCGGAAAAAGTACTCTGATGTATCAAATGGTTCTACATGCATATAAAGAATTAAATCTTAAT
GTTATCACTATCGAAAACCCAGTTGAGCAATTACTAAAAGGCATTACCCAAATATCAATAAATAAAAAGGCAGGTATAGA
CTACATAAGTTCATTTAAAGCTATATTAAGATGTGATCCTGATATTATTTTAATAGGTGAAATAAGAGACGCAGAAGTTG
CTAAATGTGTTATTCAAGCTAGTTTGAGTGGACACCTTGTATTATCAACCATGCATTCTACTAATTGTAGAGGTGCATTA
CTTCGATTACTTGAGATGGGAATTTCAATTCAAGAATTAACTCAATCTATCAATATCATTTCTAATCAAAGATTAATAAC
GACTACTCAGAATGAGCGTCGGTTAATTTGTGAAACAATAGATAAAAAGCAGATACAATATTTCTTCGAGCATGAACAAA
CAATGCCACTTAATTTTAATAATTTAGAACAGCAATTAAATTTATTATCTAAAGAAGGAACAATTTGTGAAGATACTGCA
AGTAAATATTTTTAA
TTGAAACTATTATTCAGAGAGATAGTTAATAAAGCTATTTCAAAAAATGCGAGCGACATACATTTTATCCCTTCAGTTGA
TGAAGTTCATATTAAATTTAGAATTAATGATTATCTTGAACTTTATGAAATATTCAACTTAGATGTATATCAAAAATTAT
TAGTTTTTATGAAGTTCAAATCAGGTTTGGACGTTTCATCTCAACAATCCGCTCAAAGTGGTCGTTATACTTATCAATCT
AAATCTACTTTTTATTTACGGATTTCAACATTACCTTTGTCTTTAGGTGTAGAAAGTTGTGTAATTAGGATAATTCCTCA
ATATTTTCAAGCAAAAAAAGAATATAAAGAATTTAACGATTTTAAACACTTAGTAAATAAAAAACAGGGATTAATTCTAT
TAACTGGACCCACAGGATCCGGAAAAAGTACTCTGATGTATCAAATGGTTCTACATGCATATAAAGAATTAAATCTTAAT
GTTATCACTATCGAAAACCCAGTTGAGCAATTACTAAAAGGCATTACCCAAATATCAATAAATAAAAAGGCAGGTATAGA
CTACATAAGTTCATTTAAAGCTATATTAAGATGTGATCCTGATATTATTTTAATAGGTGAAATAAGAGACGCAGAAGTTG
CTAAATGTGTTATTCAAGCTAGTTTGAGTGGACACCTTGTATTATCAACCATGCATTCTACTAATTGTAGAGGTGCATTA
CTTCGATTACTTGAGATGGGAATTTCAATTCAAGAATTAACTCAATCTATCAATATCATTTCTAATCAAAGATTAATAAC
GACTACTCAGAATGAGCGTCGGTTAATTTGTGAAACAATAGATAAAAAGCAGATACAATATTTCTTCGAGCATGAACAAA
CAATGCCACTTAATTTTAATAATTTAGAACAGCAATTAAATTTATTATCTAAAGAAGGAACAATTTGTGAAGATACTGCA
AGTAAATATTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
65.944 |
99.691 |
0.657 |
| comGA | Staphylococcus aureus N315 |
65.944 |
99.691 |
0.657 |