Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   EL334_RS09985 Genome accession   NZ_AP019192
Coordinates   1839140..1839760 (-) Length   206 a.a.
NCBI ID   WP_000839908.1    Uniprot ID   A0A0H2URP6
Organism   Streptococcus pneumoniae strain ASP0581     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1834140..1844760
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL334_RS09960 (ASP0581_18610) recA 1834518..1835684 (-) 1167 WP_001085463.1 recombinase RecA Machinery gene
  EL334_RS09965 (ASP0581_18620) cinA 1835739..1836995 (-) 1257 WP_033705137.1 competence/damage-inducible protein A Machinery gene
  EL334_RS09970 (ASP0581_18630) brpA 1837079..1838095 (-) 1017 WP_000239282.1 biofilm formation/cell division transcriptional regulator BrpA -
  EL334_RS09975 (ASP0581_18640) - 1838103..1838621 (-) 519 WP_000455537.1 GNAT family N-acetyltransferase -
  EL334_RS09980 (ASP0581_18650) tsaE 1838611..1839054 (-) 444 WP_000288232.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  EL334_RS09985 (ASP0581_18660) comM 1839140..1839760 (-) 621 WP_000839908.1 hypothetical protein Regulator
  EL334_RS09995 (ASP0581_18670) - 1840143..1840598 (-) 456 Protein_1861 XRE family transcriptional regulator -
  EL334_RS10000 - 1840609..1841423 (-) 815 Protein_1862 IS5-like element IS1515 family transposase -
  EL334_RS10010 - 1841459..1841879 (-) 421 Protein_1863 helix-turn-helix domain-containing protein -
  EL334_RS10015 (ASP0581_18700) - 1842225..1844240 (+) 2016 WP_033705590.1 DUF1430 domain-containing protein -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23552.72 Da        Isoelectric Point: 10.1254

>NTDB_id=61462 EL334_RS09985 WP_000839908.1 1839140..1839760(-) (comM) [Streptococcus pneumoniae strain ASP0581]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKKSVKLFYSMLLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYVRDFLAMLDRKKTVLVTILATLLFLRNPMTI
VSLLIYIGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIVTLIFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=61462 EL334_RS09985 WP_000839908.1 1839140..1839760(-) (comM) [Streptococcus pneumoniae strain ASP0581]
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCCTATGGAAGGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGCATGGTTTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACCCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGAAGTCGGTGAAGCTTTTTTACAGTATGTTACTCTTA
ATTAATTTGTTAGGAGCTGTTCTTGTTTTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTCTTTTTCCTATTTGGGCTAGATTTGCTGATTTTTTTACCCTTGAAAAAATACGTGCGCGATTTTC
TTGCTATGCTAGACAGAAAAAAGACAGTGTTGGTGACTATTTTAGCAACACTTCTTTTCTTAAGAAATCCAATGACCATT
GTCTCACTTCTGATTTATATTGGACTGGGCTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAGAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGTTACGCTCATTTTCTTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2URP6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

100

100

1
  comM Streptococcus pneumoniae R6

100

100

1
  comM Streptococcus pneumoniae TIGR4

100

100

1
  comM Streptococcus mitis NCTC 12261

38.974

94.66

0.369
  comM Streptococcus mitis SK321

38.974

94.66

0.369

Multiple sequence alignment