Detailed information NTG0614453

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: NQD66_RS10330
• Genome accession: NZ_CP101995
• Coordinates: 2036281..2037390 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264863.1
• Uniprot ID: Q8DWQ8
• Organism: Streptococcus agalactiae strain BCJB2983
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2031281..2042390

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQD66_RS10305 (NQD66_10300)	-	2031653..2032492 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
NQD66_RS10310 (NQD66_10305)	pgsA	2032492..2033034 (-)	543	WP_000976003.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
NQD66_RS10315 (NQD66_10310)	yfmH	2033157..2034440 (-)	1284	WP_000217755.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
NQD66_RS10320 (NQD66_10315)	yfmF	2034442..2035686 (-)	1245	WP_000706188.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
NQD66_RS10325 (NQD66_10320)	yaaA	2035925..2036278 (+)	354	WP_000384871.1	S4 domain-containing protein YaaA	-
NQD66_RS10330 (NQD66_10325)	recF	2036281..2037390 (+)	1110	WP_000264863.1	DNA replication/repair protein RecF	Machinery gene
NQD66_RS10335 (NQD66_10330)	-	2037402..2038268 (-)	867	WP_000398683.1	GRP family sugar transporter	-
NQD66_RS10340 (NQD66_10335)	-	2038324..2038986 (-)	663	WP_001865840.1	helix-turn-helix transcriptional regulator	-
NQD66_RS10345 (NQD66_10340)	guaB	2039061..2040542 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
NQD66_RS10350 (NQD66_10345)	-	2040699..2041184 (-)	486	WP_001034427.1	arginine repressor	-
NQD66_RS10355 (NQD66_10350)	-	2041194..2041874 (-)	681	WP_000628851.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42526.35 Da
• Isoelectric Point: 7.3132

>NTDB_id=614453 NQD66_RS10330 WP_000264863.1 2036281..2037390(+) (recF) [Streptococcus agalactiae strain BCJB2983]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LNLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLTVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFASQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=614453 NQD66_RS10330 WP_000264863.1 2036281..2037390(+) (recF) [Streptococcus agalactiae strain BCJB2983]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCACCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGTGGCCAT
CTTAACTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAAGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGTCTAAGACGAAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTAACAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGCTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAACATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAACGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q8DWQ8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.085	98.374	0.621
recF	Bacillus subtilis subsp. subtilis str. 168	44.565	99.729	0.444