Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   LG291_RS07280 Genome accession   NZ_CP084990
Coordinates   1396509..1396697 (+) Length   62 a.a.
NCBI ID   WP_197245493.1    Uniprot ID   -
Organism   Cytobacillus firmus strain WLG-456     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1391509..1401697
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LG291_RS07260 (LG291_07205) - 1393395..1393586 (-) 192 WP_404358363.1 DUF2929 family protein -
  LG291_RS07265 (LG291_07210) - 1393768..1394505 (+) 738 WP_404358365.1 serine aminopeptidase domain-containing protein -
  LG291_RS07270 (LG291_07215) - 1394586..1395413 (+) 828 WP_404358367.1 hypothetical protein -
  LG291_RS07275 (LG291_07220) med 1395523..1396479 (+) 957 WP_048010972.1 BMP family ABC transporter substrate-binding protein Regulator
  LG291_RS07280 (LG291_07225) comZ 1396509..1396697 (+) 189 WP_197245493.1 ComZ family protein Regulator
  LG291_RS07285 (LG291_07230) - 1396753..1397139 (-) 387 WP_252221304.1 hypothetical protein -
  LG291_RS07290 (LG291_07235) - 1397354..1398286 (+) 933 WP_404358369.1 beta-ketoacyl-ACP synthase III -
  LG291_RS07295 (LG291_07240) fabF 1398333..1399571 (+) 1239 WP_394583284.1 beta-ketoacyl-ACP synthase II -
  LG291_RS07300 (LG291_07245) - 1399810..1400475 (+) 666 WP_252221310.1 DUF2268 domain-containing putative Zn-dependent protease -
  LG291_RS07305 (LG291_07250) - 1400623..1401648 (+) 1026 WP_197207661.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7256.38 Da        Isoelectric Point: 3.9646

>NTDB_id=614204 LG291_RS07280 WP_197245493.1 1396509..1396697(+) (comZ) [Cytobacillus firmus strain WLG-456]
MNEKNMEFMQIAMKYLPEAKQQLDEAGIELSMEMIQPFMNLFTKVMNEAYEMGKTDALNESE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=614204 LG291_RS07280 WP_197245493.1 1396509..1396697(+) (comZ) [Cytobacillus firmus strain WLG-456]
ATGAACGAAAAAAACATGGAATTCATGCAAATCGCAATGAAATACTTGCCAGAAGCCAAACAGCAGCTTGACGAAGCTGG
CATCGAGCTATCTATGGAAATGATCCAGCCATTCATGAACCTATTCACCAAAGTCATGAACGAAGCCTATGAAATGGGCA
AAACGGATGCTTTGAATGAGAGTGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

73.77

98.387

0.726