Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   LG291_RS07275 Genome accession   NZ_CP084990
Coordinates   1395523..1396479 (+) Length   318 a.a.
NCBI ID   WP_048010972.1    Uniprot ID   A0AA46SKU2
Organism   Cytobacillus firmus strain WLG-456     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1390523..1401479
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LG291_RS07255 (LG291_07200) clpB 1390728..1393325 (+) 2598 WP_404358361.1 ATP-dependent chaperone ClpB -
  LG291_RS07260 (LG291_07205) - 1393395..1393586 (-) 192 WP_404358363.1 DUF2929 family protein -
  LG291_RS07265 (LG291_07210) - 1393768..1394505 (+) 738 WP_404358365.1 serine aminopeptidase domain-containing protein -
  LG291_RS07270 (LG291_07215) - 1394586..1395413 (+) 828 WP_404358367.1 hypothetical protein -
  LG291_RS07275 (LG291_07220) med 1395523..1396479 (+) 957 WP_048010972.1 BMP family ABC transporter substrate-binding protein Regulator
  LG291_RS07280 (LG291_07225) comZ 1396509..1396697 (+) 189 WP_197245493.1 ComZ family protein Regulator
  LG291_RS07285 (LG291_07230) - 1396753..1397139 (-) 387 WP_252221304.1 hypothetical protein -
  LG291_RS07290 (LG291_07235) - 1397354..1398286 (+) 933 WP_404358369.1 beta-ketoacyl-ACP synthase III -
  LG291_RS07295 (LG291_07240) fabF 1398333..1399571 (+) 1239 WP_394583284.1 beta-ketoacyl-ACP synthase II -
  LG291_RS07300 (LG291_07245) - 1399810..1400475 (+) 666 WP_252221310.1 DUF2268 domain-containing putative Zn-dependent protease -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 35572.16 Da        Isoelectric Point: 4.4144

>NTDB_id=614203 LG291_RS07275 WP_048010972.1 1395523..1396479(+) (med) [Cytobacillus firmus strain WLG-456]
MHKTLKKLGILLLCLLLLASCRQPMSAGKLEKAGLLVPDTVNDQVWGTKGYKGMLKIQSHYDIEVYYKEGMNSEMVVERA
VKEFDQKGVNLIFGHGNEYAAYFNNISKKYPDIHFVSFNGDAQNENTTSLNFEAYAMGFFGGMVAGHMTKTNNVGILAAF
EWQPEVEGFYEGANYINDNVNVQIQYVGNWDNDNKAIALLDKLIANKTDVVYPAGDGYNVPVIEKLKEEGLYAIGYISDQ
SDLGESVVLTSTIQHVDVLYELVAEKYNEGELESGNLSFDFEDEVISLGKFSPDVDEEFKKELNAVIENYKKTGKLPE

Nucleotide


Download         Length: 957 bp        

>NTDB_id=614203 LG291_RS07275 WP_048010972.1 1395523..1396479(+) (med) [Cytobacillus firmus strain WLG-456]
ATGCATAAGACATTAAAGAAATTAGGGATCCTTCTTTTGTGCCTTCTTTTATTGGCCTCCTGCAGACAGCCGATGTCTGC
AGGAAAACTTGAGAAAGCTGGATTATTAGTGCCCGATACTGTCAATGACCAAGTATGGGGAACCAAAGGCTATAAAGGCA
TGCTAAAAATTCAATCCCATTATGATATTGAGGTTTATTATAAAGAAGGTATGAATTCAGAGATGGTTGTTGAAAGAGCT
GTTAAAGAGTTTGACCAAAAAGGTGTAAACCTGATCTTTGGACATGGCAATGAATACGCTGCTTACTTTAATAACATCTC
AAAAAAATATCCTGACATTCACTTTGTCAGCTTTAATGGTGACGCCCAAAATGAAAACACCACCAGTTTGAACTTTGAAG
CATATGCCATGGGTTTCTTCGGAGGCATGGTTGCAGGACATATGACGAAAACGAATAATGTAGGAATACTGGCGGCTTTT
GAATGGCAGCCGGAAGTAGAAGGTTTTTATGAAGGTGCAAACTATATCAATGATAATGTAAACGTGCAGATCCAATATGT
CGGCAACTGGGACAATGATAACAAAGCCATCGCTCTTTTGGACAAACTTATTGCCAATAAGACAGATGTTGTATATCCGG
CCGGAGATGGGTATAATGTTCCTGTTATCGAAAAGCTGAAAGAAGAAGGGCTCTACGCCATCGGATATATTTCCGATCAG
TCTGATTTGGGTGAATCAGTCGTCCTGACCAGTACAATTCAGCATGTAGATGTTTTATATGAACTGGTGGCAGAAAAATA
TAACGAAGGTGAGCTTGAATCAGGAAATCTATCCTTCGATTTCGAGGATGAAGTGATTTCACTTGGGAAATTCAGCCCTG
ACGTCGACGAAGAATTCAAAAAAGAACTAAACGCTGTCATTGAGAATTACAAAAAAACAGGCAAATTGCCTGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(31-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

52.229

98.742

0.516