Detailed information NTG0614100

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: LG653_RS11130
• Genome accession: NZ_CP084921
• Coordinates: 2286498..2287313 (+)
• Length: 271 a.a.
• NCBI ID: WP_002121460.1
• Uniprot ID: A0A009NS11
• Organism: Acinetobacter pittii strain CEP14
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2281498..2292313

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LG653_RS11095 (LG653_11095)	kdsB	2282024..2282785 (+)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
LG653_RS11100 (LG653_11100)	holB	2282799..2283779 (+)	981	WP_002121362.1	DNA polymerase III subunit delta'	-
LG653_RS11105 (LG653_11105)	pilZ	2283790..2284131 (+)	342	WP_002121335.1	PilZ domain-containing protein	-
LG653_RS11110 (LG653_11110)	ycfH	2284149..2284922 (+)	774	WP_002121462.1	TatD family hydrolase	-
LG653_RS11115 (LG653_11115)	-	2284959..2285567 (+)	609	WP_002121414.1	TetR/AcrR family transcriptional regulator	-
LG653_RS11120 (LG653_11120)	-	2285574..2286128 (+)	555	WP_002121405.1	type II secretion system protein	-
LG653_RS11125 (LG653_11125)	xcpV	2286118..2286498 (+)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
LG653_RS11130 (LG653_11130)	xcpW	2286498..2287313 (+)	816	WP_002121460.1	type II secretion system minor pseudopilin GspJ	Machinery gene
LG653_RS11135 (LG653_11135)	gspK	2287314..2288273 (+)	960	WP_002121457.1	type II secretion system minor pseudopilin GspK	-
LG653_RS11140 (LG653_11140)	-	2288501..2289097 (+)	597	WP_002121363.1	6-carboxytetrahydropterin synthase	-
LG653_RS11145 (LG653_11145)	ung	2289151..2289864 (+)	714	WP_002121342.1	uracil-DNA glycosylase	-
LG653_RS11150 (LG653_11150)	hibch	2289861..2290985 (+)	1125	WP_016803061.1	enoyl-CoA hydratase/isomerase family protein	-
LG653_RS11155 (LG653_11155)	tadA	2290991..2291494 (+)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
LG653_RS11160 (LG653_11160)	-	2291565..2292005 (+)	441	WP_002121449.1	SRPBCC family protein	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30932.32 Da
• Isoelectric Point: 9.9694

>NTDB_id=614100 LG653_RS11130 WP_002121460.1 2286498..2287313(+) (xcpW) [Acinetobacter pittii strain CEP14]
MIKNKSFRSPSSASRLAVRSEQMMRGYSEQSSSSCTQTKHCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKMQLTVAGVNYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=614100 LG653_RS11130 WP_002121460.1 2286498..2287313(+) (xcpW) [Acinetobacter pittii strain CEP14]
ATGATAAAGAATAAAAGTTTTCGCTCTCCAAGCTCAGCTTCACGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCACTCAGACAAAGCATTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAATTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

3D structure

• AlphaFold DB: A0A009NS11

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88.889	83.026	0.738