Detailed information NTG0613800

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: NPS17_RS10025
• Genome accession: NZ_CP101985
• Coordinates: 2101290..2102381 (+)
• Length: 363 a.a.
• NCBI ID: WP_258969016.1
• Uniprot ID: -
• Organism: Streptococcus mutans strain COCC33-14R
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2096290..2107381

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NPS17_RS10000 (NPS17_10000)	pgsA	2096698..2097240 (-)	543	WP_258969013.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
NPS17_RS10005 (NPS17_10005)	-	2097252..2098229 (-)	978	WP_082999374.1	helix-turn-helix domain-containing protein	-
NPS17_RS10010 (NPS17_10010)	yfmH	2098302..2099594 (-)	1293	WP_258969014.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
NPS17_RS10015 (NPS17_10015)	yfmF	2099596..2100843 (-)	1248	WP_258969015.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
NPS17_RS10020 (NPS17_10020)	yaaA	2100922..2101287 (+)	366	WP_002275015.1	S4 domain-containing protein YaaA	-
NPS17_RS10025 (NPS17_10025)	recF	2101290..2102381 (+)	1092	WP_258969016.1	DNA replication/repair protein RecF	Machinery gene
NPS17_RS10030 (NPS17_10030)	guaB	2102544..2104025 (-)	1482	WP_002283224.1	IMP dehydrogenase	-
NPS17_RS10035 (NPS17_10035)	trpS	2104182..2105204 (-)	1023	WP_024786396.1	tryptophan--tRNA ligase	-
NPS17_RS10040 (NPS17_10040)	-	2105637..2107256 (+)	1620	WP_002266410.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 363 a.a.
• Molecular weight: 42028.26 Da
• Isoelectric Point: 9.8334

>NTDB_id=613800 NPS17_RS10025 WP_258969016.1 2101290..2102381(+) (recF) [Streptococcus mutans strain COCC33-14R]
MWIEKINLKHYRNYTAIESEFSQSLNVFVGQNAQGKTNFLEAIYFLSLTRSHRTRSDKELIQFGQKELNVSGLLNRVNGK
IPLEINLSNKGRTTKINYLKQPKLSDYIGTMTVVLFAPEDLQLIKGSPSLRRKFIDIDLGQIKPIYLSDLSNYNHALKQR
NAYLKSEKKVDTDFLFVLDEQLVDYGSKVIEHRLDFIQNLTKEADKYHFSISNQQEHLKISYLSSVKFDHKKNIRDNFLN
LLQKNRQGDIFKKNTSVGPHRDDLAFFINQMNANFGSQGQHRSLILSLKLAEIELIKTVTGDYPILLLDDVMSELDNYRQ
IKLLEGIKDNIQTFITTTSLEHLQQLPKKLKLFTINQGKVLSE

Nucleotide

• Length: 1092 bp

>NTDB_id=613800 NPS17_RS10025 WP_258969016.1 2101290..2102381(+) (recF) [Streptococcus mutans strain COCC33-14R]
ATGTGGATAGAAAAAATTAATTTAAAACATTATCGCAATTATACAGCCATTGAATCTGAATTTTCCCAAAGTCTTAATGT
TTTTGTGGGACAAAATGCTCAAGGAAAAACCAATTTCCTAGAGGCTATTTATTTTTTATCTTTAACCCGCAGTCATCGAA
CACGATCTGACAAAGAACTTATTCAATTTGGTCAAAAAGAATTAAATGTTTCTGGCCTTCTTAATCGTGTCAATGGCAAA
ATTCCTCTGGAAATCAACTTATCTAATAAAGGCCGAACAACAAAAATAAATTATCTCAAACAACCTAAACTTTCAGACTA
TATTGGAACAATGACTGTTGTTCTCTTTGCTCCAGAAGATCTTCAACTAATAAAAGGCTCCCCAAGTCTCAGAAGAAAGT
TTATTGACATTGATTTAGGACAAATCAAGCCTATTTACTTATCTGATTTATCAAATTATAATCATGCTCTTAAACAACGA
AATGCCTATTTAAAATCAGAGAAGAAGGTTGATACTGATTTTCTTTTCGTTCTAGATGAACAATTGGTAGATTATGGTAG
TAAGGTTATTGAGCATCGCCTTGATTTTATTCAAAATTTAACTAAAGAAGCTGATAAATATCATTTCTCTATTTCAAATC
AACAGGAACATTTAAAAATTTCCTACCTTTCTTCTGTTAAATTTGATCATAAAAAAAATATTCGTGATAACTTTTTAAAC
CTGCTACAAAAAAATCGGCAGGGTGATATTTTCAAAAAGAACACCAGTGTTGGTCCGCACCGCGATGATTTAGCCTTTTT
CATCAATCAAATGAACGCTAACTTTGGTAGTCAAGGACAACATCGCAGCCTTATTTTATCTTTAAAGCTGGCTGAGATTG
AACTTATAAAAACAGTCACTGGGGATTATCCTATTCTCTTGTTAGATGATGTCATGAGTGAACTTGATAATTATAGACAA
ATCAAACTTTTAGAAGGCATCAAAGATAATATTCAGACCTTTATAACAACAACTAGCCTTGAACATCTTCAACAACTCCC
TAAGAAACTAAAGTTATTTACTATCAACCAAGGAAAAGTGCTATCAGAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-357)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65	99.174	0.645
recF	Bacillus subtilis subsp. subtilis str. 168	43.631	100	0.444