Detailed information NTG0613684

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: NPS18_RS10015
• Genome accession: NZ_CP101984
• Coordinates: 2019554..2020645 (+)
• Length: 363 a.a.
• NCBI ID: WP_002262456.1
• Uniprot ID: Q8DRR3
• Organism: Streptococcus mutans strain UA-159
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2014554..2025645

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NPS18_RS09990 (NPS18_09990)	pgsA	2014962..2015504 (-)	543	WP_002262451.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
NPS18_RS09995 (NPS18_09995)	-	2015516..2016493 (-)	978	WP_002262452.1	helix-turn-helix domain-containing protein	-
NPS18_RS10000 (NPS18_10000)	yfmH	2016566..2017858 (-)	1293	WP_002352377.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
NPS18_RS10005 (NPS18_10005)	yfmF	2017860..2019107 (-)	1248	WP_002262454.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
NPS18_RS10010 (NPS18_10010)	yaaA	2019186..2019551 (+)	366	WP_002262455.1	S4 domain-containing protein YaaA	-
NPS18_RS10015 (NPS18_10015)	recF	2019554..2020645 (+)	1092	WP_002262456.1	DNA replication/repair protein RecF	Machinery gene
NPS18_RS10020 (NPS18_10020)	guaB	2020808..2022289 (-)	1482	WP_002262457.1	IMP dehydrogenase	-
NPS18_RS10025 (NPS18_10025)	trpS	2022446..2023468 (-)	1023	WP_002262458.1	tryptophan--tRNA ligase	-
NPS18_RS10030 (NPS18_10030)	-	2023901..2025520 (+)	1620	WP_002262459.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 363 a.a.
• Molecular weight: 42003.21 Da
• Isoelectric Point: 9.8334

>NTDB_id=613684 NPS18_RS10015 WP_002262456.1 2019554..2020645(+) (recF) [Streptococcus mutans strain UA-159]
MWIEKINLKHYRNYTAIESEFSQSLNVFVGQNAQGKTNFLEAIYFLSLTRSHRTRSDKELIQFGQKELNVSGLLNRVNGK
IPLEINLSNKGRTTKINYLKQPKLSDYIGTMTVVLFAPEDLQLIKGSPSLRRKFIDIDLGQIKPIYLSDLSNYNHVLKQR
NAYLKSEKKVDTDFLFVLDEQLVDYGSKVIEHRLDFIQNLTKEADKYHFSISNQQEHLKISYLSSVKFDHKKNIRDNFLN
LLQKNRQGDIFKKNTSVGPHRDDLAFFINQMNASFGSQGQHRSLILSLKLAEIELTKTVTGDYPILLLDDVMSELDNYRQ
IKLLEGIKDNVQTFITTTSLEHLQQLPKKLKLFTINQGKVLSE

Nucleotide

• Length: 1092 bp

>NTDB_id=613684 NPS18_RS10015 WP_002262456.1 2019554..2020645(+) (recF) [Streptococcus mutans strain UA-159]
ATGTGGATAGAAAAAATTAATTTAAAACATTATCGCAATTATACAGCCATTGAATCTGAATTTTCCCAAAGTCTTAATGT
TTTTGTGGGACAAAATGCTCAAGGAAAAACCAATTTCCTAGAGGCTATTTATTTTTTATCTTTAACCCGCAGTCATCGAA
CACGATCTGACAAAGAACTTATTCAATTTGGTCAAAAAGAATTAAATGTTTCTGGCCTTCTTAATCGTGTCAATGGCAAA
ATTCCTCTGGAAATCAACTTATCTAATAAAGGCCGAACAACAAAAATAAATTATCTCAAACAACCTAAACTTTCAGACTA
TATTGGAACAATGACTGTTGTTCTCTTTGCTCCAGAAGATCTTCAACTAATAAAAGGCTCCCCAAGTCTCAGAAGAAAGT
TTATTGACATTGATTTAGGACAAATCAAGCCTATTTACTTATCTGATTTATCAAATTATAATCATGTTCTTAAACAACGA
AACGCCTATTTAAAATCAGAGAAGAAGGTTGATACTGATTTTCTTTTCGTTCTAGATGAACAATTGGTAGATTATGGTAG
TAAGGTTATTGAGCATCGCCTTGATTTTATTCAAAATTTAACTAAAGAAGCTGATAAATATCATTTCTCTATTTCAAATC
AACAGGAACATTTAAAAATTTCCTACCTTTCTTCTGTTAAATTTGATCATAAAAAAAATATTCGTGATAACTTTTTAAAC
CTGCTACAAAAAAATCGGCAGGGTGATATTTTCAAAAAGAACACCAGTGTTGGTCCACACCGCGATGATTTAGCCTTTTT
CATCAATCAAATGAACGCTAGCTTTGGTAGTCAAGGACAACATCGCAGCCTTATTTTATCTTTAAAGCTGGCTGAGATTG
AACTTACAAAAACAGTCACTGGGGATTATCCTATTCTCTTGTTAGATGATGTCATGAGTGAACTTGATAATTATAGACAA
ATCAAACTTTTAGAAGGCATCAAAGATAATGTTCAGACCTTTATAACAACAACTAGCCTTGAACATCTTCAACAACTCCC
TAAGAAACTAAAGTTATTTACTATCAACCAAGGAAAAGTGCTATCAGAATAG

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-357)

3D structure

• AlphaFold DB: Q8DRR3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65	99.174	0.645
recF	Bacillus subtilis subsp. subtilis str. 168	43.631	100	0.444