Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   NP434_RS09630 Genome accession   NZ_CP101936
Coordinates   1918228..1918845 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis subsp. subtilis strain BGSC 10A5     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1913228..1923845
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP434_RS09600 (NP434_09600) yndJ 1913580..1915187 (+) 1608 WP_256683453.1 YndJ family protein -
  NP434_RS09605 (NP434_09605) - 1915277..1915591 (+) 315 WP_166668700.1 hypothetical protein -
  NP434_RS09610 (NP434_09610) pghL 1915815..1916573 (+) 759 WP_033885141.1 gamma-polyglutamate hydrolase PghL -
  NP434_RS09615 (NP434_09615) - 1916600..1917049 (-) 450 WP_003245454.1 YndM family protein -
  NP434_RS09620 (NP434_09620) fosM 1917258..1917691 (+) 434 Protein_1844 FosM family fosfomycin resistance protein -
  NP434_RS09625 (NP434_09625) - 1917600..1917857 (+) 258 WP_371929877.1 hypothetical protein -
  NP434_RS09630 (NP434_09630) dinR/lexA 1918228..1918845 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  NP434_RS09635 (NP434_09635) yneA 1918995..1919312 (+) 318 WP_015252003.1 cell division suppressor protein YneA -
  NP434_RS09640 (NP434_09640) dinL 1919331..1919984 (+) 654 WP_015714011.1 recombinase family protein -
  NP434_RS09645 (NP434_09645) ynzC 1920048..1920281 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  NP434_RS09650 (NP434_09650) recP/tkt 1920450..1922453 (+) 2004 WP_014476936.1 transketolase Machinery gene
  NP434_RS09655 (NP434_09655) sirA 1922606..1923052 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  NP434_RS09660 (NP434_09660) yneF 1923138..1923356 (+) 219 WP_003221221.1 YneF family protein -
  NP434_RS09665 (NP434_09665) ynzD 1923430..1923603 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=613336 NP434_RS09630 WP_003238209.1 1918228..1918845(-) (dinR/lexA) [Bacillus subtilis subsp. subtilis strain BGSC 10A5]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=613336 NP434_RS09630 WP_003238209.1 1918228..1918845(-) (dinR/lexA) [Bacillus subtilis subsp. subtilis strain BGSC 10A5]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GACTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1