Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   NP436_RS19835 Genome accession   NZ_CP101932
Coordinates   3690380..3690754 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis subsp. natto strain BGSC 27E1     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3685380..3695754
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP436_RS19805 (NP436_19805) - 3685545..3685706 (-) 162 WP_003227632.1 hypothetical protein -
  NP436_RS19810 (NP436_19810) glpX 3685921..3686886 (-) 966 WP_014481197.1 class II fructose-bisphosphatase -
  NP436_RS19815 (NP436_19815) murAB 3686917..3688206 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  NP436_RS19820 (NP436_19820) - 3688447..3688584 (-) 138 WP_014481198.1 hypothetical protein -
  NP436_RS19825 (NP436_19825) fsa 3688584..3689222 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  NP436_RS19830 (NP436_19830) fbaA 3689342..3690199 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  NP436_RS19835 (NP436_19835) letA 3690380..3690754 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  NP436_RS19840 (NP436_19840) ywjG 3690920..3691441 (+) 522 WP_014481199.1 DUF2529 domain-containing protein -
  NP436_RS19845 (NP436_19845) pyrG 3691523..3693130 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  NP436_RS19850 (NP436_19850) rpoE 3693372..3693878 (-) 507 WP_014481200.1 DNA-directed RNA polymerase subunit delta -
  NP436_RS19855 (NP436_19855) acdA 3694061..3695200 (-) 1140 WP_014481201.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=613251 NP436_RS19835 WP_003227621.1 3690380..3690754(-) (letA) [Bacillus subtilis subsp. natto strain BGSC 27E1]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=613251 NP436_RS19835 WP_003227621.1 3690380..3690754(-) (letA) [Bacillus subtilis subsp. natto strain BGSC 27E1]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAAGAATCGAAGGAATTGGGCGCCCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363