Detailed information NTG0612964

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: LHJ62_RS14815
• Genome accession: NZ_CP084733
• Coordinates: 3043238..3044356 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: A0A9P2XLL8
• Organism: Acinetobacter baumannii strain HKU3
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3038238..3049356

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LHJ62_RS14805 (LHJ62_14805)	-	3041354..3042046 (-)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-
LHJ62_RS14810 (LHJ62_14810)	pilT	3042173..3043210 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
LHJ62_RS14815 (LHJ62_14815)	pilU	3043238..3044356 (+)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
LHJ62_RS14820 (LHJ62_14820)	fur	3044426..3044863 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
LHJ62_RS14825 (LHJ62_14825)	-	3044975..3045373 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
LHJ62_RS14830 (LHJ62_14830)	-	3045428..3045751 (-)	324	WP_000442587.1	RnfH family protein	-
LHJ62_RS14835 (LHJ62_14835)	-	3045751..3046818 (-)	1068	WP_002019572.1	hypothetical protein	-
LHJ62_RS14840 (LHJ62_14840)	-	3046971..3047426 (-)	456	WP_000782976.1	bacteriohemerythrin	-
LHJ62_RS14845 (LHJ62_14845)	-	3047679..3048527 (-)	849	WP_000336548.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=612964 LHJ62_RS14815 WP_000347039.1 3043238..3044356(+) (pilU) [Acinetobacter baumannii strain HKU3]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=612964 LHJ62_RS14815 WP_000347039.1 3043238..3044356(+) (pilU) [Acinetobacter baumannii strain HKU3]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395