Detailed information NTG0612609

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: LG401_RS05455
• Genome accession: NZ_CP084711
• Coordinates: 1118651..1119613 (+)
• Length: 320 a.a.
• NCBI ID: WP_034663299.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain AR03
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1113651..1124613

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LG401_RS05425 (LG401_05425)	argF	1113981..1114931 (+)	951	WP_060595992.1	ornithine carbamoyltransferase	-
LG401_RS05430 (LG401_05430)	-	1115034..1115213 (+)	180	WP_034663316.1	YjzC family protein	-
LG401_RS05435 (LG401_05435)	-	1115382..1116647 (+)	1266	WP_034663308.1	MFS transporter	-
LG401_RS05440 (LG401_05440)	-	1116766..1116960 (-)	195	WP_003211779.1	YjzD family protein	-
LG401_RS05445 (LG401_05445)	-	1117172..1117912 (+)	741	WP_060595993.1	hypothetical protein	-
LG401_RS05450 (LG401_05450)	-	1117988..1118560 (+)	573	WP_212040941.1	nad binding enzyme	-
LG401_RS05455 (LG401_05455)	med	1118651..1119613 (+)	963	WP_034663299.1	BMP family ABC transporter substrate-binding protein	Regulator
LG401_RS05460 (LG401_05460)	comZ	1119624..1119821 (+)	198	WP_003211983.1	ComZ family protein	Regulator
LG401_RS05465 (LG401_05465)	-	1119831..1120064 (-)	234	WP_034663296.1	hypothetical protein	-
LG401_RS05470 (LG401_05470)	-	1120234..1121172 (+)	939	WP_106156897.1	beta-ketoacyl-ACP synthase III	-
LG401_RS05475 (LG401_05475)	fabF	1121194..1122435 (+)	1242	WP_212040942.1	beta-ketoacyl-ACP synthase II	-
LG401_RS05480 (LG401_05480)	-	1122513..1123307 (+)	795	WP_060595996.1	DUF2268 domain-containing protein	-
LG401_RS05485 (LG401_05485)	-	1123476..1124456 (+)	981	WP_226509425.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 35693.57 Da
• Isoelectric Point: 5.2616

>NTDB_id=612609 LG401_RS05455 WP_034663299.1 1118651..1119613(+) (med) [Bacillus pumilus strain AR03]
MKYQRLVMIFSFLLLLSACSQAPLKGQIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGNKPQADNVANVTFKGEAMGFFGGMTAAHMSKSKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYTIIAKKFNEGKLNEQGDYSFDFKEGVIEMGKFSSTIDRAFVKDIESDIATYKKTGKLPNEK

Nucleotide

• Length: 963 bp

>NTDB_id=612609 LG401_RS05455 WP_034663299.1 1118651..1119613(+) (med) [Bacillus pumilus strain AR03]
ATGAAGTATCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCACAGGCACCTTTAAAAGGACA
GATTGAGAAGGTGGGTTTACTCGTCCCCGATACAATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATTCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAAGAGAAAATCGTTGATGCCATTGAA
GAATTTCACAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTAATTAGTGAAGA
TTATCCGAAAACACAATTTATCACGGTAAATGGAAACAAGCCTCAGGCGGATAATGTCGCGAATGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCAAAATCAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGATGGCTTTATCAAAGGTGCAAAATATCAAGATGAACATGTACAAGTGCTTGCCGAGTTTGTCGA
AAACTGGGATGATGCTGACAAAGCCGTGGAGCTCTATCAAAAATTGAAAAAGCAGGGCGTAGATGTTGTATATCCAGCAG
GCGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGATATGTCACTGATCAATCC
AACCTCGGCAGTCATACCGTCTTAACAAGCACAGTCCAGCATGTGGATAAAGCGTACACTATTATTGCGAAGAAATTTAA
TGAAGGCAAGCTAAACGAACAAGGTGACTACTCCTTTGATTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGTTCCA
CCATTGACCGTGCTTTTGTGAAAGATATTGAAAGTGATATTGCGACTTACAAAAAAACTGGCAAACTGCCAAATGAAAAG
TGA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (28-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	64.537	97.813	0.631