Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   LBPG_RS07670 Genome accession   NC_022112
Coordinates   1577211..1578452 (-) Length   413 a.a.
NCBI ID   WP_003565798.1    Uniprot ID   A0A0C9PVU8
Organism   Lacticaseibacillus paracasei subsp. paracasei 8700:2     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1572211..1583452
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LBPG_RS07665 (LBPG_00259) - 1575459..1577186 (-) 1728 WP_003565796.1 proline--tRNA ligase -
  LBPG_RS07670 (LBPG_00258) eeP 1577211..1578452 (-) 1242 WP_003565798.1 RIP metalloprotease RseP Regulator
  LBPG_RS07675 (LBPG_00257) - 1578469..1579257 (-) 789 WP_003565800.1 phosphatidate cytidylyltransferase -
  LBPG_RS07680 (LBPG_00256) - 1579293..1580045 (-) 753 WP_003570430.1 isoprenyl transferase -
  LBPG_RS07685 (LBPG_00255) frr 1580575..1581132 (-) 558 WP_003565804.1 ribosome recycling factor -
  LBPG_RS07690 (LBPG_00254) pyrH 1581132..1581851 (-) 720 WP_003565806.1 UMP kinase -
  LBPG_RS07695 (LBPG_00253) tsf 1582087..1582968 (-) 882 WP_003565808.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45107.72 Da        Isoelectric Point: 8.6663

>NTDB_id=61180 LBPG_RS07670 WP_003565798.1 1577211..1578452(-) (eeP) [Lacticaseibacillus paracasei subsp. paracasei 8700:2]
MTTIIAFIVIFCILVVVHEFGHFYFAKRSGILVREFSIGMGPKLWASHKNNTTYTLRLLPLGGYVRMAGWQDEEDEIKPG
TMLSLILNDQGKVVRINASDKTTLAGGMPVQVSRVDLVKDLVIEGYPNGDETALQTWQVDHDATIIEEDGTEVQIAPEDV
QFQNAPVWRRLLVNFAGPMNNFLLAILAFIIYGLFFGVQVLNTNQIGTVVPGYPAAEAGLKSNATVQTIDGQKMSSFTDL
SKIVSKNAGKSVTFTVKENGKSKNIVIKPNKEGKIGVEAHVDKSPANAIPFGFSQTWNLAVRTWDVLKSMVTGGFSLNKL
AGPVGIYTMTSQSAKGGIQGLLFFMGYLSLGLGITNLLPIPVLDGGKILLNLIEIIRRKPLKPETEGVVTMIGLGLMVLL
MLAVTINDIMRYF

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=61180 LBPG_RS07670 WP_003565798.1 1577211..1578452(-) (eeP) [Lacticaseibacillus paracasei subsp. paracasei 8700:2]
ATGACCACTATCATCGCCTTTATCGTTATCTTCTGCATTCTTGTGGTAGTTCACGAGTTTGGCCATTTTTACTTTGCAAA
ACGCAGCGGCATTCTAGTCCGGGAATTTTCGATCGGTATGGGCCCGAAGCTATGGGCGTCGCACAAGAACAATACGACCT
ACACGCTGCGGTTGCTACCCCTTGGCGGATACGTCCGCATGGCTGGCTGGCAAGATGAGGAGGACGAGATTAAGCCCGGG
ACGATGCTGAGCCTGATTCTTAACGATCAAGGCAAGGTTGTCCGGATCAATGCCAGTGACAAAACGACTTTGGCCGGCGG
AATGCCGGTTCAAGTGAGTCGCGTCGATTTAGTTAAGGATCTGGTGATTGAAGGTTATCCAAACGGGGATGAAACAGCCT
TGCAAACTTGGCAGGTTGACCACGATGCGACGATCATTGAAGAAGACGGAACCGAGGTTCAGATCGCGCCAGAAGACGTT
CAGTTTCAAAACGCCCCGGTTTGGCGCCGGTTATTGGTCAACTTCGCCGGTCCGATGAATAACTTCTTACTCGCGATTCT
AGCTTTTATTATTTACGGTCTGTTTTTTGGTGTTCAGGTGCTCAATACCAACCAAATCGGAACAGTTGTGCCAGGTTATC
CAGCCGCAGAAGCTGGTCTTAAGTCCAATGCGACGGTGCAAACGATTGACGGTCAAAAAATGTCATCATTCACGGATCTT
TCAAAGATCGTCAGTAAAAATGCCGGTAAATCAGTGACATTTACCGTGAAGGAAAACGGTAAAAGCAAGAACATCGTGAT
CAAGCCGAATAAGGAAGGCAAGATCGGGGTTGAAGCACACGTCGATAAGTCCCCAGCAAATGCCATTCCTTTTGGCTTTT
CTCAAACTTGGAATTTGGCTGTCCGCACTTGGGACGTGCTCAAATCCATGGTGACCGGCGGTTTTTCACTCAATAAACTG
GCTGGCCCGGTTGGTATTTATACCATGACGAGTCAAAGTGCCAAAGGCGGTATTCAAGGATTACTCTTCTTTATGGGTTA
CTTGAGTCTCGGCTTAGGGATTACCAATTTATTGCCGATTCCAGTGCTTGATGGTGGTAAAATTCTTTTGAACCTGATCG
AAATTATTCGCCGTAAGCCATTAAAACCGGAAACGGAAGGCGTTGTGACCATGATTGGCTTGGGCCTGATGGTTCTATTA
ATGCTAGCGGTCACAATCAACGATATCATGCGCTACTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(206-257)

Peptidase family M50 (Peptidase_M50)

(6-400)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C9PVU8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.292

100

0.506
  eeP Streptococcus thermophilus LMD-9

49.057

100

0.504

Multiple sequence alignment