Detailed information NTG0611787

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: NOO62_RS13990
• Genome accession: NZ_CP101750
• Coordinates: 3070949..3072235 (-)
• Length: 428 a.a.
• NCBI ID: WP_268771223.1
• Uniprot ID: -
• Organism: Streptomyces sp. Je 1-369
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3065949..3077235

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NOO62_RS13970 (NOO62_13985)	-	3066563..3067453 (+)	891	WP_268771220.1	hypothetical protein	-
NOO62_RS13975 (NOO62_13990)	-	3067591..3068302 (-)	712	Protein_2769	IS200/IS605 family accessory protein TnpB-related protein	-
NOO62_RS13980 (NOO62_13995)	-	3069013..3069708 (+)	696	WP_268771221.1	hypothetical protein	-
NOO62_RS13985 (NOO62_14000)	-	3069842..3070855 (+)	1014	WP_268771222.1	hypothetical protein	-
NOO62_RS13990 (NOO62_14005)	clpX	3070949..3072235 (-)	1287	WP_268771223.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
NOO62_RS13995 (NOO62_14010)	clpP	3072402..3073097 (-)	696	WP_268771224.1	ATP-dependent Clp protease proteolytic subunit	Regulator
NOO62_RS14000 (NOO62_14015)	clpP	3073159..3073764 (-)	606	WP_268775614.1	ATP-dependent Clp protease proteolytic subunit	Regulator
NOO62_RS14005 (NOO62_14020)	tig	3074162..3075538 (-)	1377	WP_268771225.1	trigger factor	-
NOO62_RS14020 (NOO62_14035)	-	3076025..3076219 (-)	195	WP_268771226.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46829.59 Da
• Isoelectric Point: 4.7023

>NTDB_id=611787 NOO62_RS13990 WP_268771223.1 3070949..3072235(-) (clpX) [Streptomyces sp. Je 1-369]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREMEEKDQFEDIMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELEFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRSNVNPTLVPREARGGGAGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=611787 NOO62_RS13990 WP_268771223.1 3070949..3072235(-) (clpX) [Streptomyces sp. Je 1-369]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGTCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGTAACGAGATCATCGAGGAAGAGCTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTCCCCAAGCCTCGCGAGATCTACGAATTCCTTGAGGGCTACGTCGTGGGCCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTAGCGGTGTACAACCACTACAAGCGGGTCCAGGCAGGAGAGAACGGCGGCGCGCAGGGCCG
TGACGACGCGATCGAACTCGCGAAGTCCAACATTCTGCTGCTCGGCCCGACCGGCTCCGGCAAGACGCTCCTCGCGCAGA
CGCTGGCGCGCATGCTGAACGTTCCGTTCGCCATCGCGGACGCGACGGCGCTCACGGAGGCGGGCTATGTCGGGGAGGAC
GTCGAGAACATCCTCCTGAAGCTGATCCAGGCGGCTGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTGGCTCGCAAGAGCGAGAACCCCTCGATCACGCGCGATGTCAGCGGCGAGGGCGTCCAGCAGGCGC
TCCTCAAGATCCTGGAGGGCACGACGGCGTCGGTGCCCCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTCGAGAAGATCATCGAGTCGCGGGCGGGCGC
GAAGGGCATCGGCTTCGGCGCCACCATCCGCTCCAAGCGCGAGATGGAGGAGAAGGACCAGTTCGAGGACATCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTGATCACCTCGGTCCACAACCTCGACCGT
GAGGCTCTGCTCCAGATCCTCGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTGTTCGAACTCGACGGCGT
GGAGCTGGAGTTCGAGCGTGAGGCCCTTGAGGCCATCGCGGACCAGGCGATCCTGCGGCAGACCGGCGCGCGCGGTCTGC
GCGCCATCATGGAGGAAGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTGGCCCGTGTCGTCATCACG
GCGGACGTCGTCCGCTCGAACGTGAACCCGACGCTGGTGCCGCGCGAGGCGCGGGGCGGCGGCGCCGGGGAACAGAAGTC
GGCCTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.184	93.925	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.612	96.262	0.526