Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   LE165_RS06415 Genome accession   NZ_CP084434
Coordinates   1327686..1328351 (-) Length   221 a.a.
NCBI ID   WP_084951345.1    Uniprot ID   -
Organism   Staphylococcus lugdunensis strain RMLUG2     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1322686..1333351
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LE165_RS06390 (LE165_06400) - 1322876..1323355 (-) 480 WP_070647761.1 DUF4064 domain-containing protein -
  LE165_RS06395 (LE165_06405) - 1323442..1323891 (-) 450 WP_002478516.1 DUF4064 domain-containing protein -
  LE165_RS06400 (LE165_06410) - 1323933..1325933 (-) 2001 WP_012990692.1 FtsX-like permease family protein -
  LE165_RS06405 (LE165_06415) - 1325917..1326666 (-) 750 WP_002492476.1 ABC transporter ATP-binding protein -
  LE165_RS06410 (LE165_06420) braS 1326772..1327680 (-) 909 WP_037545648.1 sensor histidine kinase Regulator
  LE165_RS06415 (LE165_06425) braR 1327686..1328351 (-) 666 WP_084951345.1 response regulator transcription factor Regulator
  LE165_RS12760 - 1328567..1328671 (-) 105 Protein_1232 hypothetical protein -
  LE165_RS06425 (LE165_06435) - 1328890..1330338 (+) 1449 WP_002478511.1 alkaline phosphatase -
  LE165_RS06430 (LE165_06440) wecB 1330524..1331663 (-) 1140 WP_252920628.1 non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase -
  LE165_RS06435 (LE165_06445) - 1331706..1332977 (-) 1272 WP_002478509.1 nucleotide sugar dehydrogenase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25798.73 Da        Isoelectric Point: 4.6843

>NTDB_id=611247 LE165_RS06415 WP_084951345.1 1327686..1328351(-) (braR) [Staphylococcus lugdunensis strain RMLUG2]
MRIMIVEDDIVIRESLAGELMKWNYDVVAVDTFDDIVSWFVKYEPDLVLLDINLPTLNGFHWCQEIRKSSNVPIIFISSR
TDNMDQIMAIQMGGDDFIEKPFNLSLTVTKIQALLRRTYDLTVNHNETTVRDCKLIIDEATLYYKEESVHLSFTELQIIK
MLFDNQGKYVSRTALIEKCWESEHFIDDNTLAVNMTRLRKKLNSIGLEDFIETKKNIGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=611247 LE165_RS06415 WP_084951345.1 1327686..1328351(-) (braR) [Staphylococcus lugdunensis strain RMLUG2]
ATGAGGATTATGATTGTTGAGGATGATATTGTGATTCGCGAGAGTTTGGCTGGTGAACTGATGAAGTGGAATTATGATGT
GGTTGCTGTAGATACCTTTGATGATATTGTGTCTTGGTTCGTAAAGTATGAACCAGATTTAGTGTTGTTGGACATTAATT
TACCTACATTGAATGGATTTCACTGGTGCCAAGAAATTCGCAAATCGTCAAATGTACCAATTATTTTTATTAGCTCACGC
ACGGATAATATGGATCAGATTATGGCGATACAAATGGGGGGAGATGACTTTATAGAAAAACCATTTAATCTGTCATTGAC
CGTAACAAAGATTCAAGCTTTGCTTCGTCGAACTTATGATTTAACTGTGAATCATAATGAAACGACAGTTCGTGACTGTA
AGTTGATTATTGATGAAGCAACGCTTTATTACAAAGAAGAATCGGTACATTTATCATTTACAGAGTTACAAATTATTAAA
ATGCTGTTTGATAATCAAGGTAAATATGTCAGTCGCACAGCGTTAATTGAAAAATGCTGGGAGTCTGAACACTTTATTGA
TGACAATACGCTTGCGGTAAATATGACACGCTTACGCAAAAAACTTAATTCTATAGGGCTTGAAGATTTTATTGAAACAA
AAAAGAATATAGGATATAAGGTTTAA

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

76.471

100

0.765